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output read cluster information #25

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gudeqing opened this issue Aug 26, 2020 · 0 comments
Open

output read cluster information #25

gudeqing opened this issue Aug 26, 2020 · 0 comments

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@gudeqing
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gudeqing commented Aug 26, 2020

Hi,@sfchen
Is it possible to output read cluster information? Following is my intention:

  • Stat which bases were corrected by genecore.
  • The sequencing error detected by gencore should be highly trusted. And correction detail may provide a solid base ground for modeling sequencing error.
  • The learned model should be a good guider to eliminate or include mutation when evidence such as supporting reads are rare.

Maybe this idea could be incorporated into gencore to further reduce sequencing error when a cluster size is small. Looking forward to your comment.
Best regards!

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