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Torsion Sampling #11

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jameseastwood opened this issue Aug 11, 2023 · 2 comments · May be fixed by #20
Open

Torsion Sampling #11

jameseastwood opened this issue Aug 11, 2023 · 2 comments · May be fixed by #20
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@jameseastwood
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jameseastwood commented Aug 11, 2023

Type
System sampling check
Question
Is phase space well sampled?
How
Minima sampled ~60%
Tool
MDA + rdkit
Note
Ideally what you should be looking at here is a combination of the solvent, vacuum, and complex differences and the variation in dihedral sampling across lambda states. I.e. is there a major change happening in my transformation that isn't being sampled across all states -- @IAlibay

@RiesBen RiesBen linked a pull request Sep 26, 2023 that will close this issue
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@RiesBen
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RiesBen commented Sep 26, 2023

@jameseastwood I somehow di dnot manage to link this to the PR, that closes this task. ... But there is now a new "task" in the project linked to the pr. shall we close this one then? :)

New Task: #20

@jameseastwood jameseastwood linked a pull request Sep 26, 2023 that will close this issue
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@jameseastwood
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No problem, I linked them. Carry on with the PR, and it will close this issue when you merge the PR.

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2 participants