Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Expanding the list of parameters #8

Open
sinhaharsh opened this issue Mar 6, 2023 · 3 comments
Open

Expanding the list of parameters #8

sinhaharsh opened this issue Mar 6, 2023 · 3 comments

Comments

@sinhaharsh
Copy link
Collaborator

See the categorization of DICOM parameters as given in BIDS Specification.

  1. Try to add these parameters to MRdataset
  2. Categorize parameters w.r.t. the subsections highlighted on the page.
  3. In addition, categorize each parameter as required / recommended / optional
@sinhaharsh
Copy link
Collaborator Author

MRI acquisition parameters are divided into several categories based on "A checklist for fMRI acquisition methods reporting in the literature" (article) by Ben Inglis.
The acquisition reporting checklist is also included in OHBM COBIDAS report

@raamana
Copy link
Contributor

raamana commented Apr 20, 2023

great finds - let's make sure to implement both in our choices!

First on the recommendations by Ben (good friend of our niQC efforts) - what more parameters can we easily add that they recommend we check? we might need to do this for revisions

@sinhaharsh
Copy link
Collaborator Author

sinhaharsh commented May 5, 2023

Great resource. Mapping from parameter names to DICOM tags
https://github.com/rordenlab/dcm2niix/blob/fe2f26005109f396a4f828aa438241f73fc25fe8/BIDS/README.md

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants