From b6a73143c688805c478c141106c5160e36c4135c Mon Sep 17 00:00:00 2001 From: Asieh Golozar <57408355+golozara@users.noreply.github.com> Date: Mon, 15 Jan 2024 04:27:29 -0500 Subject: [PATCH] Update development.rmd moved the Move Goals and notable challenges to the Development effort as discussed. --- rmd/development.rmd | 74 +++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 74 insertions(+) diff --git a/rmd/development.rmd b/rmd/development.rmd index cee15e8..c6ce520 100644 --- a/rmd/development.rmd +++ b/rmd/development.rmd @@ -45,6 +45,80 @@ output:
--- +------------------------------------------------------------------------ + +# **Goals** + +The overarching goals of the OHDSI Oncology Working Group: + +
+ +### 1) Oncology research + +- Enabling +- Conducting +- Promoting + +### 2) Maturing oncology standards + +- Data model, ontologies and conventions +- A shared, international oncology data standard +- Support of observational, claims and curated data sources + +### 3) Community growth + +- Model adoption and growth of network +- Data holders, developers, and subject matter experts +- Research use cases and applications + +### 4) Transparency + +- Clear processes and mechanisms for collaboration +- Thorough documentation of conventions and approaches +- Open-source development and project management + +
+ +------------------------------------------------------------------------ + +# **Notable Challenges** + +
+ +### 1) Oncology data in OMOP + +- OMOP typically a person-centric model + - Oncology data often requires additional levels of detail + - e.g., "Observations about observations" +- Novel entity relationships in source data + + +
+ + + +### 2) Source data representations + +- Differing granularity and detail between data sources +- Goal of maximum accommodation while maintaing FAIR principles +- Sources include observational, claims and curated data + - Sources often overlap and can provide complementary data for same patient population + +
+ + +
+ +Condition Map + +
Diagram illustrating condition modifier representation
+ +
+ +
+ +------------------------------------------------------------------------ + # **Context**