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ChangeLog
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======================================================================
Originator: Chris Fischer
Date: 1-27-2021
Tag: cime5.8.37
Answer Changes: Some fill_values and pgi on cheyenne
Tests: scripts_regression_tests
Dependencies:
Brief Summary:
- wait_for_tests: tweak cdash nml compare column.
- Pio bld fixes.
- pnetcdf detection correction.
- Added deleted f10_f10_musgs grid back into config_grids.xml.
- Changes needed to create fractions/masks at runtime with NUOPC.
- Better create_test/wait_for_tests integration.
- Add support for Chrysalis in saving provenance info.
- Remove unused logic.
- Update PIO2 to latest version and add testing support for PIO async tests.
- Update esmf to latest on cheyenne.
- Add pnetcdf module to centos7-linux build.
- Allow srt to skip some tests.
- Pass integer and not floating point for cpus-per-task.
- Need to get queue from case, not batch object.
- Update cheyenne esmf build.
- Seq io fix pio2.
- Add some SCREAM config dirs.
- Update to PyCECT 3.2.0.
- Update pgi and esmf on cheyenne.
- Add memory usage logging.
- Facilitate adding defaults for a namelist group conditionally.
- Add a mask.
- Check if TEST_ROOT exists earlier in cleanup from scripts_regression_tests.
- query_testlists: replace newlines in comments with spaces.
User interface changes:
- Slight change to output of query_testlists
PR summary: git log --oneline --first-parent [previous_tag]..master
d005fc583 Merge pull request #3829 from ESMCI/jgfouca/tweak_cdash_nml_output
1c949c056 Merge pull request #3837 from jedwards4b/pio_bld_fixes
738bd23c4 Merge pull request #3822 from jedwards4b/pio2_pnetcdf_detection
6df28a93b Merge pull request #3832 from ESMCI/mvertens/bugfix_f10maskusgs
79ad32f53 Merge pull request #3827 from ESMCI/mvertens/dynfrac
6834f9da8 Merge pull request #3824 from ESMCI/jgfouca/misc_cime_updates
10675d59e Merge pull request #3819 from ESMCI/worleyph/chrysalis_support
cc2fa1c85 Merge pull request #3809 from ESMCI/jgfouca/minor_makefile_cleanup
b71c1f341 Merge pull request #3817 from jedwards4b/pio_async
c0b4e0714 update esmf to latest on cheyenne
52e50f9f1 add pnetcdf module to centos7-linux build
c9c7f88e2 Merge pull request #3821 from jedwards4b/skip_tests
93243a4d8 Merge pull request #3820 from adityakavalur/patch-1
7e9ee92fa need to get queue from case, not batch object
c6a0fe00e update cheyenne esmf build
d74ba19a7 Merge pull request #3811 from jedwards4b/seq_io_fix_pio2
56a4ebb62 Merge pull request #3813 from ESMCI/jgfouca/add_scream_config_files
00a9e6205 Merge pull request #3812 from ESMCI/fischer/pycect_update
2818cf59c Merge pull request #3803 from jedwards4b/cheyenne_pgi
aecb9b1dc Merge pull request #3801 from ESMCI/azamat/driver/mem-profile-logging
ac45f7a7e Merge pull request #3804 from billsacks/nmlgen_skip_groups
6dc716233 Merge pull request #3800 from jedwards4b/add_a_mask
0d18eabfa Merge pull request #3798 from ESMCI/wpcoomb_fix_cleanup_in_regression_tests
22276aad9 Merge pull request #3797 from billsacks/no_newline_in_query_testlists
Modified files: git diff --name-status [previous_tag]
M .github/workflows/srt.yml
M config/cesm/config_grids.xml
M config/cesm/machines/config_machines.xml
M config/e3sm/config_files.xml
M config/xml_schemas/config_grids_v2.1.xsd
M config/xml_schemas/config_grids_v2.xsd
M scripts/Tools/Makefile
M scripts/Tools/cime_bisect
M scripts/Tools/wait_for_tests
M scripts/create_test
M scripts/lib/CIME/SystemTests/system_tests_common.py
M scripts/lib/CIME/XML/env_batch.py
M scripts/lib/CIME/XML/env_run.py
M scripts/lib/CIME/XML/grids.py
M scripts/lib/CIME/XML/namelist_definition.py
M scripts/lib/CIME/bless_test_results.py
M scripts/lib/CIME/case/case.py
M scripts/lib/CIME/case/case_setup.py
M scripts/lib/CIME/compare_namelists.py
M scripts/lib/CIME/cs_status.py
M scripts/lib/CIME/nmlgen.py
M scripts/lib/CIME/provenance.py
M scripts/lib/CIME/test_scheduler.py
M scripts/lib/CIME/test_status.py
M scripts/lib/CIME/test_utils.py
M scripts/lib/CIME/wait_for_tests.py
M scripts/lib/get_tests.py
M scripts/tests/scripts_regression_tests.py
M src/build_scripts/buildlib.pio
M src/drivers/mct/cime_config/buildnml
M src/drivers/mct/cime_config/config_component_cesm.xml
M src/drivers/mct/cime_config/config_component_e3sm.xml
M src/drivers/mct/cime_config/namelist_definition_drv.xml
M src/drivers/mct/main/cime_comp_mod.F90
M src/drivers/mct/main/seq_hist_mod.F90
M src/drivers/mct/main/seq_io_mod.F90
M src/drivers/mct/shr/seq_comm_mct.F90
M src/externals/pio2/.gitignore
M src/externals/pio2/CMakeLists.txt
M src/externals/pio2/configure.ac
M src/externals/pio2/examples/CMakeLists.txt
M src/externals/pio2/examples/c/example1.c
M src/externals/pio2/examples/c/example2.c
M src/externals/pio2/examples/f03/CMakeLists.txt
A src/externals/pio2/examples/f03/exampleAsyncPio.F90
M src/externals/pio2/examples/f03/examplePio.F90
M src/externals/pio2/src/clib/pio.h
M src/externals/pio2/src/clib/pio_darray.c
M src/externals/pio2/src/clib/pio_error.h
M src/externals/pio2/src/clib/pio_getput_int.c
M src/externals/pio2/src/clib/pio_internal.h
M src/externals/pio2/src/clib/pio_msg.c
M src/externals/pio2/src/clib/pio_nc.c
M src/externals/pio2/src/clib/pio_rearrange.c
M src/externals/pio2/src/clib/pio_spmd.c
M src/externals/pio2/src/clib/pioc.c
M src/externals/pio2/src/clib/pioc_support.c
M src/externals/pio2/src/flib/ncint_mod.F90
M src/externals/pio2/src/flib/pio.F90
M src/externals/pio2/src/flib/pio_nf.F90
M src/externals/pio2/src/flib/pio_types.F90
M src/externals/pio2/src/flib/piolib_mod.F90
M src/externals/pio2/src/flib/pionfget_mod.F90.in
M src/externals/pio2/tests/cunit/CMakeLists.txt
M src/externals/pio2/tests/cunit/test_async_1d.c
M src/externals/pio2/tests/cunit/test_async_3proc.c
M src/externals/pio2/tests/cunit/test_async_4proc.c
M src/externals/pio2/tests/cunit/test_async_manyproc.c
M src/externals/pio2/tests/cunit/test_async_multi2.c
M src/externals/pio2/tests/cunit/test_async_multicomp.c
M src/externals/pio2/tests/cunit/test_async_perf.c
M src/externals/pio2/tests/cunit/test_async_simple.c
M src/externals/pio2/tests/cunit/test_darray_2sync.c
M src/externals/pio2/tests/cunit/test_darray_async.c
A src/externals/pio2/tests/cunit/test_darray_async_from_comm.c
M src/externals/pio2/tests/cunit/test_darray_async_many.c
M src/externals/pio2/tests/cunit/test_darray_async_simple.c
M src/externals/pio2/tests/cunit/test_perf2.c
M src/externals/pio2/tests/cunit/test_rearr.c
M src/externals/pio2/tests/fncint/ftst_pio.f90
M src/externals/pio2/tests/general/CMakeLists.txt
M src/externals/pio2/tests/general/Makefile.am
M src/externals/pio2/tests/general/ncdf_get_put.F90.in
A src/externals/pio2/tests/general/pio_decomp_tests_2d_async.F90.in
A src/externals/pio2/tests/general/pio_decomp_tests_2d_halo.F90.in
A src/externals/pio2/tests/general/pio_decomphalo_tests_2d.F90.in
A src/externals/pio2/tests/general/pio_iosystem_async_tests.F90.in
M src/externals/pio2/tests/general/run_tests.sh.in
M src/externals/pio2/tests/general/util/pio_tf_f90gen.pl
M src/externals/pio2/tests/general/util/pio_tutil.F90
M src/externals/pio2/tests/ncint/pio_err_macros.h
M src/externals/pio2/tests/performance/pioperformance.F90
M src/share/nuopc/seq_drydep_mod.F90
M src/share/streams/shr_dmodel_mod.F90
M src/share/streams/shr_strdata_mod.F90
M src/share/unit_test_stubs/pio/pio.F90.in
M src/share/util/shr_pio_mod.F90
A tools/statistical_ensemble_test/pyCECT/CHANGES.rst
M tools/statistical_ensemble_test/pyCECT/EET.py
M tools/statistical_ensemble_test/pyCECT/LICENSE.txt
A tools/statistical_ensemble_test/pyCECT/README.rst
D tools/statistical_ensemble_test/pyCECT/README_pyCECT.rst
D tools/statistical_ensemble_test/pyCECT/README_pyEnsSum.rst
D tools/statistical_ensemble_test/pyCECT/README_pyEnsSumPop.rst
D tools/statistical_ensemble_test/pyCECT/beta06_ens_excluded_varlist.json
D tools/statistical_ensemble_test/pyCECT/beta06_ens_excluded_varlist_a.json
A tools/statistical_ensemble_test/pyCECT/docs/Makefile
A tools/statistical_ensemble_test/pyCECT/docs/conf.py
A tools/statistical_ensemble_test/pyCECT/docs/index.rst
A tools/statistical_ensemble_test/pyCECT/docs/make.bat
A tools/statistical_ensemble_test/pyCECT/docs/requirements.txt
A tools/statistical_ensemble_test/pyCECT/docs/source/installation.rst
A tools/statistical_ensemble_test/pyCECT/docs/source/pyCECT.rst
A tools/statistical_ensemble_test/pyCECT/docs/source/pyEnsSum.rst
A tools/statistical_ensemble_test/pyCECT/docs/source/pyEnsSumPop.rst
A tools/statistical_ensemble_test/pyCECT/docs/source/readme.rst
R100 tools/statistical_ensemble_test/pyCECT/exclude_empty.json tools/statistical_ensemble_test/pyCECT/empty_excluded.json
D tools/statistical_ensemble_test/pyCECT/ens_excluded_varlist.json
D tools/statistical_ensemble_test/pyCECT/ens_sub.pbs
D tools/statistical_ensemble_test/pyCECT/ens_sub.sh
A tools/statistical_ensemble_test/pyCECT/excluded_varlist.json
D tools/statistical_ensemble_test/pyCECT/gm_cumul.sh
M tools/statistical_ensemble_test/pyCECT/pyCECT.py
M tools/statistical_ensemble_test/pyCECT/pyEnsLib.py
M tools/statistical_ensemble_test/pyCECT/pyEnsSum.py
M tools/statistical_ensemble_test/pyCECT/pyEnsSumPop.py
A tools/statistical_ensemble_test/pyCECT/pyPlots.py
A tools/statistical_ensemble_test/pyCECT/readthedocs.yml
M tools/statistical_ensemble_test/pyCECT/test_pop_CECT.sh
A tools/statistical_ensemble_test/pyCECT/test_pyEnsSum.sh
M tools/statistical_ensemble_test/pyCECT/test_pyEnsSumPop.sh
A tools/statistical_ensemble_test/pyCECT/test_uf_cam_ect.sh
======================================================================
======================================================================
Originator: Chris Fischer
Date: 12-11-2020
Tag: cime5.8.36
Answer Changes: None
Tests: scripts_regression_tests
Dependencies:
Brief Summary:
- Add a useful check to wait_for_tests.
- Fix issue with time variable in ha files.
- Revert "Merge pull request #3788 from ESMCI/azamat/driver/mem-usage-logging."
- Add memory usage logging for memory profiling.
- Update OS process id error-checking in GPTL's get_memusage.
User interface changes:
PR summary: git log --oneline --first-parent [previous_tag]..master
a0fb01a33 Merge pull request #3796 from ESMCI/jgfouca/wait_for_tests_expect
7c9523ef3 Merge pull request #3794 from jedwards4b/cplhistavg_fix
c258cdf08 Merge pull request #3791 from ESMCI/jgfouca/revert_mem-usage-logging
9c64b5ac2 Merge pull request #3788 from ESMCI/azamat/driver/mem-usage-logging
5cef5558c Merge pull request #3781 from ESMCI/azamat/gptl/increase-pid-ceiling
Modified files: git diff --name-status [previous_tag]
A .github/workflows/srt.yml
D .travis.yml
M ChangeLog
M config/cesm/config_archive.xml
M config/cesm/config_files.xml
M config/cesm/config_grids.xml
M config/cesm/config_grids_common.xml
M config/cesm/config_grids_mct.xml
M config/cesm/config_grids_nuopc.xml
M config/cesm/config_inputdata.xml
M config/cesm/machines/Depends.intel
M config/cesm/machines/config_batch.xml
M config/cesm/machines/config_compilers.xml
M config/cesm/machines/config_machines.xml
M config/cesm/machines/config_pio.xml
M config/config_tests.xml
D config/e3sm/allactive/config_compsets.xml
D config/e3sm/allactive/config_pesall.xml
D config/e3sm/allactive/testlist_allactive.xml
D config/e3sm/config_archive.xml
M config/e3sm/config_files.xml
D config/e3sm/config_grids.xml
D config/e3sm/config_inputdata.xml
D config/e3sm/machines/Depends.cray
D config/e3sm/machines/Depends.cray.cmake
D config/e3sm/machines/Depends.gnu
D config/e3sm/machines/Depends.gnu.cmake
D config/e3sm/machines/Depends.ibm
D config/e3sm/machines/Depends.ibm.cmake
D config/e3sm/machines/Depends.intel
D config/e3sm/machines/Depends.intel.cmake
D config/e3sm/machines/Depends.nag
D config/e3sm/machines/Depends.nag.cmake
D config/e3sm/machines/Depends.summit.cmake
D config/e3sm/machines/Depends.summit.pgiacc
D config/e3sm/machines/Depends.summit.pgiacc.cmake
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M src/externals/pio2/tests/unit/basic_tests.F90
M src/externals/pio2/tests/unit/driver.F90
A src/externals/pio2/tests/unit/ftst_vars_chunking.F90
M src/externals/pio2/tests/unit/global_vars.F90
M src/externals/pio2/tests/unit/ncdf_tests.F90
R081 src/externals/pio2/tests/unit/run_tests.sh src/externals/pio2/tests/unit/run_tests.sh.in
M src/share/nuopc/seq_drydep_mod.F90
M src/share/streams/shr_dmodel_mod.F90
M src/share/streams/shr_strdata_mod.F90
M src/share/streams/shr_stream_mod.F90
D src/share/streams_nuopc/dshr_methods_mod.F90
D src/share/streams_nuopc/dshr_strdata_mod.F90
D src/share/streams_nuopc/dshr_stream_mod.F90
D src/share/streams_nuopc/dshr_tInterp_mod.F90
M src/share/timing/GPTLget_memusage.c
M src/share/timing/Makefile
M src/share/timing/perf_mod.F90
M src/share/util/shr_cal_mod.F90
M src/share/util/shr_kind_mod.F90
M src/share/util/shr_pio_mod.F90
M src/share/util/shr_scam_mod.F90
M src/share/util/shr_string_mod.F90
M tools/cprnc/CMakeLists.txt
M tools/cprnc/compare_vars_mod.F90.in
M tools/cprnc/run_tests
M tools/cprnc/test_inputs/README
A tools/cprnc/test_inputs/control_int.nc
A tools/cprnc/test_inputs/int_missing.nc
M tools/statistical_ensemble_test/ensemble.py
M tools/statistical_ensemble_test/single_run.py
======================================================================
======================================================================
Originator: Chris Fischer
Date: 12-7-2020
Tag: cime5.8.35
Answer Changes: None
Tests: scripts_regression_tests
Dependencies:
Brief Summary:
- Make the default pio_version = 2.
- Changes for nuopc xcpl_comps needed for new ice sheets capability.
- Print TPUTCOMP difference to TestStatus.log.
- Correct typo in pgi module on cheyenne.
- Changes to implement ESMF aware threading in the nuopc driver.
- Add back pio version cpp.
- Fix pgi nuopc build issue.
- More e3sm build upgrades.
- Fix some build issues, for nuopc and cam_dycore.
- Build nuopc_cap with csm_share.
- Update seq_io_write_time to work for CPLHIST run.
- Fix python3 incompatibilities in case.py.
User interface changes:
PR summary: git log --oneline --first-parent [previous_tag]..master
184f5886f Merge pull request #3732 from jedwards4b/change_pio_default_version
bfe14e4aa Merge pull request #3787 from ESMCI/mvertens/icesheets
ca6712bb8 Merge pull request #3786 from billsacks/log_tputcomp
aff5b52e2 correct typo in pgi module on cheyenne
13996b82d Merge pull request #3784 from jedwards4b/nuopc_timing_cheyenne_esmf
1bcacca70 add back pio version cpp
073f83989 fix pgi nuopc build issue
55b6096ec Merge pull request #3782 from ESMCI/jgfouca/more_e3sm_build_upgrades
c06710482 Merge pull request #3779 from jedwards4b/fix_bld_issues
9db73e464 Merge pull request #3777 from jedwards4b/add_cap_share_to_csm
e23562c59 Merge pull request #3754 from ESMCI/jonbob/update-seq-io-write-time
1b7eb3e18 Merge pull request #3765 from johnsonb-ucar/fix_python3_incompatibility_in_case
Modified files: git diff --name-status [previous_tag]
M config/cesm/machines/config_machines.xml
M config/cesm/machines/config_pio.xml
M config/xml_schemas/config_machines.xsd
M config/xml_schemas/env_mach_specific.xsd
M scripts/Tools/Makefile
M scripts/Tools/preview_run
M scripts/lib/CIME/SystemTests/system_tests_common.py
M scripts/lib/CIME/XML/env_mach_pes.py
M scripts/lib/CIME/XML/env_mach_specific.py
M scripts/lib/CIME/build.py
M scripts/lib/CIME/case/case.py
M scripts/lib/CIME/get_timing.py
M scripts/lib/CIME/provenance.py
M src/build_scripts/buildlib.csm_share
M src/build_scripts/buildlib.pio
M src/components/xcpl_comps_nuopc/xatm/src/atm_comp_nuopc.F90
M src/components/xcpl_comps_nuopc/xglc/src/glc_comp_nuopc.F90
M src/components/xcpl_comps_nuopc/xice/src/ice_comp_nuopc.F90
M src/components/xcpl_comps_nuopc/xlnd/src/lnd_comp_nuopc.F90
M src/components/xcpl_comps_nuopc/xocn/src/ocn_comp_nuopc.F90
M src/components/xcpl_comps_nuopc/xrof/src/rof_comp_nuopc.F90
M src/components/xcpl_comps_nuopc/xwav/src/wav_comp_nuopc.F90
M src/drivers/mct/cime_config/config_component.xml
M src/drivers/mct/main/seq_hist_mod.F90
M src/drivers/mct/main/seq_io_mod.F90
A src/externals/pio2/.github/workflows/a3.yml
A src/externals/pio2/.github/workflows/a4.yml
M src/externals/pio2/.github/workflows/autotools.yml
M src/externals/pio2/.github/workflows/cmake.yml
A src/externals/pio2/.github/workflows/cmake_ncint.yml
M src/externals/pio2/.github/workflows/strict_autotools.yml
M src/externals/pio2/.travis.yml
M src/externals/pio2/CMakeLists.txt
M src/externals/pio2/Makefile.am
M src/externals/pio2/cmake/LibMPI.cmake
M src/externals/pio2/cmake_config.h.in
M src/externals/pio2/configure.ac
M src/externals/pio2/ctest/runcdash-nwscla-gnu.sh
M src/externals/pio2/ctest/runcdash-nwscla-intel.sh
M src/externals/pio2/ctest/runcdash-nwscla-pgi.sh
M src/externals/pio2/examples/basic/gdecomp_mod.F90
M src/externals/pio2/examples/basic/testpio.F90
M src/externals/pio2/examples/c/Makefile.am
R087 src/externals/pio2/examples/c/run_tests.sh src/externals/pio2/examples/c/run_tests.sh.in
M src/externals/pio2/examples/f03/CMakeLists.txt
M src/externals/pio2/examples/f03/Makefile.am
R099 src/externals/pio2/examples/f03/examplePio.f90 src/externals/pio2/examples/f03/examplePio.F90
R091 src/externals/pio2/examples/f03/run_tests.sh src/externals/pio2/examples/f03/run_tests.sh.in
M src/externals/pio2/libpio.settings.in
D src/externals/pio2/set_flags.am
M src/externals/pio2/src/clib/CMakeLists.txt
M src/externals/pio2/src/clib/Makefile.am
D src/externals/pio2/src/clib/bget.c
D src/externals/pio2/src/clib/bget.h
M src/externals/pio2/src/clib/pio_darray.c
M src/externals/pio2/src/clib/pio_darray_int.c
M src/externals/pio2/src/clib/pio_file.c
M src/externals/pio2/src/clib/pio_getput_int.c
M src/externals/pio2/src/clib/pio_internal.h
M src/externals/pio2/src/clib/pio_meta.h.in
M src/externals/pio2/src/clib/pio_nc.c
M src/externals/pio2/src/clib/pio_nc4.c
M src/externals/pio2/src/clib/pio_rearrange.c
M src/externals/pio2/src/clib/pioc.c
M src/externals/pio2/src/clib/pioc_support.c
M src/externals/pio2/src/flib/CMakeLists.txt
M src/externals/pio2/src/flib/Makefile.am
M src/externals/pio2/src/flib/pio.F90
M src/externals/pio2/src/flib/pio_kinds.F90
M src/externals/pio2/src/flib/pio_nf.F90
M src/externals/pio2/src/flib/pio_support.F90
M src/externals/pio2/src/flib/pio_types.F90
M src/externals/pio2/src/flib/piodarray.F90.in
M src/externals/pio2/src/flib/piolib_mod.F90
M src/externals/pio2/src/flib/pionfatt_mod.F90.in
M src/externals/pio2/src/flib/pionfget_mod.F90.in
M src/externals/pio2/src/flib/pionfput_mod.F90.in
M src/externals/pio2/src/gptl/CMakeLists.txt
M src/externals/pio2/src/ncint/ncintdispatch.c
M src/externals/pio2/src/ncint/ncintdispatch.h
M src/externals/pio2/tests/CMakeLists.txt
M src/externals/pio2/tests/cunit/CMakeLists.txt
M src/externals/pio2/tests/cunit/Makefile.am
M src/externals/pio2/tests/cunit/pio_tests.h
R089 src/externals/pio2/tests/cunit/run_tests.sh src/externals/pio2/tests/cunit/run_tests.sh.in
M src/externals/pio2/tests/cunit/test_common.c
M src/externals/pio2/tests/cunit/test_darray_append.c
M src/externals/pio2/tests/cunit/test_darray_frame.c
M src/externals/pio2/tests/cunit/test_iosystem3.c
M src/externals/pio2/tests/cunit/test_pioc.c
A src/externals/pio2/tests/cunit/test_simple.c
M src/externals/pio2/tests/fncint/Makefile.am
R090 src/externals/pio2/tests/fncint/run_tests.sh src/externals/pio2/tests/fncint/run_tests.sh.in
M src/externals/pio2/tests/general/Makefile.am
M src/externals/pio2/tests/general/ncdf_fail.F90.in
M src/externals/pio2/tests/general/ncdf_get_put.F90.in
M src/externals/pio2/tests/general/ncdf_inq.F90.in
M src/externals/pio2/tests/general/ncdf_simple_tests.F90.in
M src/externals/pio2/tests/general/pio_decomp_fillval.F90.in
M src/externals/pio2/tests/general/pio_decomp_frame_tests.F90.in
M src/externals/pio2/tests/general/pio_decomp_tests.F90.in
M src/externals/pio2/tests/general/pio_decomp_tests_1d.F90.in
M src/externals/pio2/tests/general/pio_decomp_tests_2d.F90.in
M src/externals/pio2/tests/general/pio_decomp_tests_3d.F90.in
M src/externals/pio2/tests/general/pio_fail.F90.in
M src/externals/pio2/tests/general/pio_file_fail.F90.in
M src/externals/pio2/tests/general/pio_file_simple_tests.F90.in
M src/externals/pio2/tests/general/pio_init_finalize.F90.in
M src/externals/pio2/tests/general/pio_iosystem_tests.F90.in
M src/externals/pio2/tests/general/pio_iosystem_tests2.F90.in
M src/externals/pio2/tests/general/pio_iosystem_tests3.F90.in
M src/externals/pio2/tests/general/pio_rearr.F90.in
M src/externals/pio2/tests/general/pio_rearr_opts.F90.in
M src/externals/pio2/tests/general/pio_rearr_opts2.F90.in
R094 src/externals/pio2/tests/general/run_tests.sh src/externals/pio2/tests/general/run_tests.sh.in
M src/externals/pio2/tests/general/util/pio_tf_f90gen.pl
M src/externals/pio2/tests/general/util/pio_tutil.F90
A src/externals/pio2/tests/ncint/CMakeLists.txt
M src/externals/pio2/tests/ncint/Makefile.am
R091 src/externals/pio2/tests/ncint/run_perf.sh src/externals/pio2/tests/ncint/run_perf.sh.in
R079 src/externals/pio2/tests/ncint/run_tests.sh src/externals/pio2/tests/ncint/run_tests.sh.in
M src/externals/pio2/tests/ncint/tst_ncint_async_perf.c
M src/externals/pio2/tests/ncint/tst_ncint_perf.c
A src/externals/pio2/tests/ncint/tst_var_compress.c
M src/externals/pio2/tests/performance/Makefile.am
M src/externals/pio2/tests/performance/pioperformance.F90
R090 src/externals/pio2/tests/performance/run_tests.sh src/externals/pio2/tests/performance/run_tests.sh.in
M src/externals/pio2/tests/unit/CMakeLists.txt
M src/externals/pio2/tests/unit/Makefile.am
M src/externals/pio2/tests/unit/basic_tests.F90
M src/externals/pio2/tests/unit/driver.F90
A src/externals/pio2/tests/unit/ftst_vars_chunking.F90
M src/externals/pio2/tests/unit/global_vars.F90
M src/externals/pio2/tests/unit/ncdf_tests.F90
R081 src/externals/pio2/tests/unit/run_tests.sh src/externals/pio2/tests/unit/run_tests.sh.in
M src/share/timing/perf_mod.F90
M src/share/util/shr_pio_mod.F90
======================================================================
======================================================================
Originator: Chris Fischer
Date: 11-12-2020
Tag: cime5.8.34
Answer Changes: None
Tests: code-checker, ERP_Ln9.f09_f09_mg17.F2000climo.cheyenne_intel.cam-outfrq9s_mg3
github actions, scripts_regression_tests.py, P_TestJenkinsGenericJob
Dependencies:
Brief Summary:
- MPAS build fix for nag and pgi.
- Remove timing flags for e3sm build.
- New build wrapper for e3sm.
- More build updates for e3sm.
- Revert one e3sm-only line change for timing.
- Avoid building CDEPS with CTSM's LILAC.
- Add ability to add timings to all build operations for E3SM.
- Rename _separate_builds to _user_separate_builds.
- Support separate_builds for tests.
- Add an error check for separate builds.
- Merge branch 'master'.
- Merge branch 'master'.
- Fix merge issue.
- Remove the flags that fail the ERP test.
- Fix E3SM nightly TSC test failure.
- Revert "Use enhanced compiler flags for PUMAS/MG3 related F90 codes".
- Use enhanced compiler flags for PUMAS/MG3 related F90 codes.
- Create srt.yml.
- ESMF and pgi cheyenne update.
- Correctly attribute scorpio timers in cime_pre_init2.
- Fix test Y for nuopc driver.
- Add nuopc tests to cdash.
- Fix hang in TESTRUNDIFFRESUBMIT.
- Fix for pop ecosys rh files.
- Merge branch 'master'.
- Update ESMF on cheyenne.
- Change name ccsm cppdefs.
- Fixes Y_TestUserConcurrentMods by adding a more-robust waiting scheme.
- Add a no-submit option to jenkins_generic_job.
- In MEMLEAK checks, skip first day memory highwater while initializing.
- Some updates to E3SM test infrastructure.
- Add EAM case for 20TR CMIP6 docn component.
- Fix check_input_data to fail over to svn when a wget download fails.
- Change permissions on ref case rpointer files.
User interface changes:
PR summary: git log --oneline --first-parent [previous_tag]..master
726e53cf7 Merge pull request #3775 from ESMCI/fischer/MPAS_build
a64bdaef6 Merge pull request #3774 from ESMCI/jgfouca/remove_timing
f80d0d085 Merge pull request #3773 from ESMCI/jgfouca/e3sm_compile_wrap
e8bda07ed Merge pull request #3772 from ESMCI/jgfouca/more_build_updates
c23554bdd Revert one e3sm-only line change for timing
9d4b101a1 Merge pull request #3770 from billsacks/lilac_no_cdeps_v2
7855ee406 Merge pull request #3767 from ESMCI/jgfouca/e3sm_build_timings
12d98a4a5 Merge pull request #3764 from ESMCI/jgfouca/another_build_fix
5316eabdf Merge pull request #3761 from ESMCI/jgfouca/sep_builds_for_tests
c75b863a7 Merge pull request #3760 from ESMCI/jgfouca/add_error_check_sep_builds
798bea6b9 Merge branch 'master' of https://github.com/ESMCI/cime
775b67815 Merge branch 'master' of https://github.com/ESMCI/cime
0c0227c58 fix merge issue
3adf301d8 Merge pull request #3757 from sjsprecious/enhanced_compiler_flags
810e0e7a7 Merge pull request #3755 from ESMCI/mkstratos/fix_tsc_test
9df7abc1b Merge pull request #3753 from ESMCI/revert-3752-enhanced_compiler_flags
068b57aa4 Merge pull request #3752 from sjsprecious/enhanced_compiler_flags
d1fac4348 Merge pull request #3748 from ESMCI/add_github_action
10e20076d Merge pull request #3747 from ESMCI/esmf_and_pgi_cheyenne_update
7b9ba680a Merge pull request #3740 from ESMCI/worleyph/driver/fix-e3sm-issue-3886
f7dfa69db Merge pull request #3746 from jedwards4b/nuopc_Y_testfix
0d621adf8 add nuopc tests to cdash
c892b0fec Merge pull request #3744 from ESMCI/jgfouca/fix_test_rundiff_resubmit_hang
634b33d3b fix for pop ecosys rh files
01b0e9f7b Merge branch 'master' of https://github.com/ESMCI/cime
4021365b2 update esmf on cheyenne
fb2a56cf5 Merge pull request #3737 from ESMCI/wpcoomb_change_name_CCSM_cppdefs
dffe4b939 Merge pull request #3739 from ESMCI/jgfouca/fix_current_mods_test
af7c1e726 Merge pull request #3738 from ESMCI/jgfouca/jenkins_no_submit
c97d17e47 Merge pull request #3736 from ESMCI/azamat/memleak-tests/skip-first-mem-highwater
83a941283 Merge pull request #3734 from ESMCI/jgfouca/update_e3sm_test_infra
83ed19271 Merge pull request #3729 from ESMCI/rljacob/docn/add-eam
64bdbbbdb Merge pull request #3730 from lukaszlacinski/lukaszlacinski/check_input_data
82ac63dc7 Merge pull request #3726 from jedwards4b/rpointer_perms
Modified files: git diff --name-status [previous_tag]
A .github/workflows/srt.yml
D .travis.yml
M ChangeLog
M config/cesm/config_archive.xml
M config/cesm/machines/Depends.intel
M config/cesm/machines/config_machines.xml
M config/config_tests.xml
M scripts/Tools/Makefile
M scripts/Tools/case.build
A scripts/Tools/e3sm_compile_wrap.py
M scripts/Tools/jenkins_generic_job
M scripts/lib/CIME/SystemTests/system_tests_common.py
M scripts/lib/CIME/build.py
M scripts/lib/CIME/buildlib.py
M scripts/lib/CIME/case/case.py
M scripts/lib/CIME/case/case_run.py
M scripts/lib/CIME/case/case_st_archive.py
M scripts/lib/CIME/case/check_input_data.py
M scripts/lib/CIME/get_timing.py
M scripts/lib/CIME/hist_utils.py
M scripts/lib/CIME/provenance.py
M scripts/lib/CIME/tests/SystemTests/test_system_tests_compare_two.py
M scripts/lib/CIME/wait_for_tests.py
M scripts/tests/CTestConfig.cmake
M scripts/tests/scripts_regression_tests.py
M scripts/tests/user_mods_test3/shell_commands
M src/build_scripts/buildlib.csm_share
M src/build_scripts/buildlib.internal_components
M src/build_scripts/buildlib_cmake.internal_components
M src/components/data_comps_mct/docn/cime_config/config_component.xml
M src/drivers/mct/cime_config/buildlib_cmake
M src/drivers/mct/main/cime_comp_mod.F90
M src/drivers/mct/main/cime_driver.F90
======================================================================
======================================================================
Originator: Chris Fischer
Date: 11-2-2020
Tag: cime5.8.33
Answer Changes: None
Tests: code-checker, ERP_Ln9.f09_f09_mg17.F2000climo.cheyenne_intel.cam-outfrq9s_mg3
github actions, scripts_regression_tests.py, P_TestJenkinsGenericJob
Dependencies:
Brief Summary:
- Support separate_builds for tests.
- Add an error check for separate builds.
- Merge branch 'master'.
- Merge branch 'master'.
- Fix merge issue.
- Remove the flags that fail the ERP test.
- Fix E3SM nightly TSC test failure.
- Revert "Use enhanced compiler flags for PUMAS/MG3 related F90 codes".
- Use enhanced compiler flags for PUMAS/MG3 related F90 codes.
- Create srt.yml.
- ESMF and pgi cheyenne update.
- Correctly attribute scorpio timers in cime_pre_init2.
- Fix test Y for nuopc driver.
- Add nuopc tests to cdash.
- Fix hang in TESTRUNDIFFRESUBMIT.
- Fix for pop ecosys rh files.
- Merge branch 'master'.
- Update ESMF on cheyenne.
- Change name ccsm cppdefs.
- Fixes Y_TestUserConcurrentMods by adding a more-robust waiting scheme.
- Add a no-submit option to jenkins_generic_job.
- In MEMLEAK checks, skip first day memory highwater while initializing.
- Some updates to E3SM test infrastructure.
- Add EAM case for 20TR CMIP6 docn component.
- Fix check_input_data to fail over to svn when a wget download fails.
- Change permissions on ref case rpointer files.
- Add support for MPAS grids.
- Allow for different atm names in chem_mech file generation.
- Change name of cam to eam in E3SM.
- Add mpi_init timer and ouput memory usage before CIME Run loop.
- Fix path to FMS in CESM.
- Support csh source cmd.
- Skip preview namelist.
- Downgrade Intel Compiler for UFS applications.
- Add JRA Repeat Year Forcing data modes.
- Change name of clm to elm in E3SM.
- Update cmeps paths.
- Fix mct build issue.
- Fix path the cmeps buildexe.
- Fix path to cdeps buildlib for cesm.
- Update impi version for ufs model.
- Change name of clm to elm in E3SM.
- Change NCPL's for G-case default and grids EC30 to 60E2r2 and WC14 to 60E2r3.
- Sets coupling frequencies for new MPAS-Ocean grid in E3SM.
- Include submodule status in provenance.
- Cime changes required by the topounit inplementation in E3SM.
- Update for UFS app.
User interface changes:
PR summary: git log --oneline --first-parent [previous_tag]..master
5316eabdf Merge pull request #3761 from ESMCI/jgfouca/sep_builds_for_tests
c75b863a7 Merge pull request #3760 from ESMCI/jgfouca/add_error_check_sep_builds
798bea6b9 Merge branch 'master' of https://github.com/ESMCI/cime
775b67815 Merge branch 'master' of https://github.com/ESMCI/cime