DESCRIPTION

Package: TADkit
Title: TAD and HiC matrix visualisation tool kit
Version: 0.1.0.1000
Authors@R: 
    person("Nicolas", "MARY", , "nicolas.mary@envt.fr", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-7304-5555 "))
URL: https://github.com/Nico-FR/TADkit
BugReports: https://github.com/Nico-FR/TADkit/issues
Description: Tools to plot domains (e.g Topological Associated Domain) with other tracks (covegares, annotations and bedgraph datas) and to plot matrix with few tracks (domains and loops). Tools to analyzed distributions of genomic annotations in relations to domains...
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Suggests: 
    knitr,
    rmarkdown,
    GenomicFeatures,
    EnsDb.Hsapiens.v86,
    airway,
    testthat (>= 3.0.0)
VignetteBuilder: knitr
biocViews:
Imports: 
    S4Vectors,
    GenomicRanges,
    IRanges,
    GenomeInfoDb,
    BiocGenerics,
    Gviz,
    rtracklayer,
    methods,
    ggplot2,
    scales,
    plyr,
    dplyr,
    magrittr,
    utils,
    tidyr,
    viridis,
    Matrix,
    rhdf5,
    preprocessCore
Depends: 
    R (>= 4.2.0)
LazyData: true
License: MIT + file LICENSE
Config/testthat/edition: 3