diff --git a/HCK19_2024_Remote/README.md b/HCK19_2024_Remote/README.md new file mode 100644 index 000000000..25cb47824 --- /dev/null +++ b/HCK19_2024_Remote/README.md @@ -0,0 +1,90 @@ +NWB Data Conversion Workshop Banner + +# NWB Data Conversion Workshop 2024 + + * [Dates and Location](#dates-and-location) + * [Registration](#registration) + * [Logistics](#logistics) + * [Organizing Committee](#organizing-committee) + * [Resources](#resources) + * [What to bring?](#what-to-bring) + * [Objective](#objective) + * [Agenda](#agenda) + * [Code of Conduct](#code-of-conduct) + * [Disclaimer](#disclaimer) + + +## Dates and Location + +- **Dates:** June 12-14, 2024 +- **Location:** Virtual + +## Registration + +Register for the event [here](https://forms.gle/pTsjRMEqsgCRo3VD8). + +## Logistics + +We will be using Zoom for the meeting. We will send an email in the days before the workshop with Zoom links. + +## Organizing Committee + +**Program chair:** [Steph Prince](https://crd.lbl.gov/divisions/scidata/computational-biosciences/members/staff/stephanie-prince/) and [Oliver Rübel](https://crd.lbl.gov/divisions/scidata/mla/staff/oliver-ruebel/) + +## What to bring? + +* Bring any example data sets needed for your project with you to the hackathon. For any lab-specific data (i.e., + data not in NWB), you should know how to read the data using Python or MATLAB and ideally have scripts ready for + reading the data. +* Bring your laptop with appropriate software installed. For installation instructions see: + * [**PyNWB (Python)**](https://pynwb.readthedocs.io/en/stable/install_users.html). + * [**MatNWB (Matlab)**](https://neurodatawithoutborders.github.io/matnwb/) +* For an overview of NWB software, see also: + * [**Glossary of Core NWB Tools**](https://nwb-overview.readthedocs.io/en/latest/core_tools/core_tools_home.html) + * [**Glossary of Analysis and Visualization Tools**](https://nwb-overview.readthedocs.io/en/latest/tools/tools_home.html) +* For an overview of NWB see the [**NWB Overview Docs**](https://nwb-overview.readthedocs.io) + +## Objective + +The [Neurodata Without Borders](nwb.org) project is an effort to standardize the description and storage of neurophysiology +data and metadata. NWB enables data sharing and reuse and reduces the energy barrier to applying data analytics both within +and across labs. NWB has seen wide adoption in the neurophysiology community, and there are now over 100 datasets on the +DANDI Archive in NWB, including data from the Allen Institute and the International Brain Laboratory. + +The NWB Data Conversion Workshop will train users how to convert their data to NWB and publish it on the DANDI Archive. +We will work with members of the neuroscience community that want to apply NWB to their datasets. We will train +attendees, starting from the basics and proceeding to advanced data engineering techniques to maximally utilize the +features of the HDF5 and Zarr backends. During this workshop, we will also introduce and train users on NWB GUIDE, a +no-code user interface for data conversion. + +**Note:** This event is meant to foster community and collaboration around NWB, not competition. As such, this is really +more of a "workshop" or "tutorial" than a "hackathon." There will be no judges nor prizes. Participants will be expected +to bring data from their own lab, bring their own tool, or other relevant project and/or collaborate with others to +build integration with NWB. + +## Agenda + +{% include_relative agenda/AGENDA.md %} + +## Code of Conduct + +Please see the [Code of Conduct](https://neurodatawithoutborders.github.io/nwb_hackathons/code_of_conduct) for all NWB events. + + +## Disclaimer + +This website and related content were prepared as an account of or to expedite work sponsored at least in part by +the United States Government. While we strive to provide correct information, neither the United States Government +nor any agency thereof, nor The Regents of the University of California, nor any of their employees, makes any +warranty, express or implied or assumes any legal responsibility for the accuracy, completeness, or usefulness of +any information, apparatus, product, or process disclosed, or represents that its use would not infringe privately +owned rights. Reference herein to any specific commercial product, process, or service by its trade name, trademark, +manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, recommendation, or favoring by +the United States Government or any agency thereof, or The Regents of the University of California. Use of the +Laboratory or University’s name for endorsements is prohibited. The views and opinions of authors expressed herein +do not necessarily state or reflect those of the United States Government or any agency thereof or The Regents of +the University of California. Neither Berkeley Lab nor its employees are agents of the US Government. Berkeley Lab +web pages link to many other websites. Such links do not constitute an endorsement of the content or company and we +are not responsible for the content of such links. + + diff --git a/HCK19_2024_Remote/agenda/AGENDA.md b/HCK19_2024_Remote/agenda/AGENDA.md new file mode 100644 index 000000000..c8dd13d3e --- /dev/null +++ b/HCK19_2024_Remote/agenda/AGENDA.md @@ -0,0 +1,11 @@ +**The agenda is a work in +progress! Further details will be announced here as they become available** + + + + + + + + diff --git a/HCK19_2024_Remote/images/logo_brain_text_white_hor.png b/HCK19_2024_Remote/images/logo_brain_text_white_hor.png new file mode 100644 index 000000000..a174b2812 Binary files /dev/null and b/HCK19_2024_Remote/images/logo_brain_text_white_hor.png differ diff --git a/README.md b/README.md index 3dea7b928..fbfa7ee77 100644 --- a/README.md +++ b/README.md @@ -7,6 +7,7 @@ - [Cosyne: February 2024](Cosyne_2024/README.md) - A tutorial session on NWB and DANDI will be held during the Computational and Systems Neuroscience (COSYNE) 2024 conference in Lisbon, Portugal on **February 29, 2024**. - [NWB Developer Hackathon: April 2024](HCK18_2024_Dev_Hackathon_DataJoint/README.md): **April 17 - 19, 2023** at DataJoint Headquarters in Houston, TX, USA +- [NWB Data Conversion Workshop: June 2024](HCK19_2024_Remote/README.md) - **June 12 - 14, 2024** (virtual) - [NeuroDataReHack: July 2024](HCK21_2024_Janelia_NDRH/README.md) - NeuroDataReHack 3 will be held at HHMI Janelia Research Campus in Ashburn, Virginia, USA **July 8-12, 2024**.