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add XCP-D #567

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stebo85 opened this issue Jan 18, 2024 · 1 comment
Open

add XCP-D #567

stebo85 opened this issue Jan 18, 2024 · 1 comment

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stebo85 commented Jan 18, 2024

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@stebo85 stebo85 converted this from a draft issue Jan 18, 2024
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stebo85 commented Jan 18, 2024

https://www.biorxiv.org/content/10.1101/2023.11.20.567926v1

https://hub.docker.com/r/pennlinc/xcp_d/tags/

https://github.com/PennLINC/xcp_d?tab=readme-ov-file

XCP-D paves the final section of the reproducible and scalable route from the MRI scanner to functional connectivity data in the hands of neuroscientists. We developed XCP-D to extend the BIDS and NiPrep apparatus to the point where data is most commonly consumed and analyzed by neuroscientists studying functional connectivity. Thus, with the development of XCP-D, data can be automatically preprocessed and analyzed in BIDS format, using NiPrep-style containerized code, all the way from the scanner to functional connectivity matrices.

XCP-D picks up right where fMRIprep ends, directly consuming the outputs of fMRIPrep. XCP-D leverages the BIDS and NiPrep frameworks to automatically generate denoised BOLD images, parcellated time series, functional connectivity matrices, and quality assessment reports. XCP-D can also process outputs from: NiBabies and Minimally preprocessed HCP data.

@stebo85 stebo85 moved this from New to External volunteer needed in NeuroDesk Jan 18, 2024
@stebo85 stebo85 moved this from External volunteer needed to Internal volunteer needed in NeuroDesk Aug 21, 2024
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