diff --git a/recipes/qsmxt/build.sh b/recipes/qsmxt/build.sh index 6c2f8b3a..3d964e13 100755 --- a/recipes/qsmxt/build.sh +++ b/recipes/qsmxt/build.sh @@ -80,14 +80,6 @@ neurodocker generate ${neurodocker_buildMode} \ --env JULIA_DEPOT_PATH="/opt/julia_depot" \ --run="julia install_packages.jl" \ --env JULIA_DEPOT_PATH="~/.julia:/opt/julia_depot" \ - --workdir="/opt" \ - --run="git clone --depth 1 --branch v0.93 https://github.com/QSMxT/QSMxT-UI" \ - --run="wget https://nodejs.org/dist/v14.17.0/node-v14.17.0-linux-x64.tar.xz \ - && tar xf node-v14.17.0-linux-x64.tar.xz \ - && rm node-v14.17.0-linux-x64.tar.xz" \ - --env PATH="\${PATH}:/opt/node-v14.17.0-linux-x64/bin" \ - --run="cd QSMxT-UI/frontend/ && npm install && CI=false npm run build" \ - --run="cd QSMxT-UI/api/ && npm install --unsafe-perm && npm i -g ts-node" \ --env DEPLOY_PATH="/opt/ants-2.3.4/:/opt/FastSurfer" \ --env DEPLOY_BINS="nipypecli:bet:dcm2niix:Bru2:Bru2Nii:tgv_qsm:julia:python3:python:pytest:predict_all.py:qsmxt:dicom-sort:dicom-convert:nifti-convert" \ --env LC_ALL="C.UTF-8" \