From a804f25cfa7dcb03bc608145404f03618333cfb2 Mon Sep 17 00:00:00 2001 From: Neurodesk Github Action Runner Date: Fri, 18 Oct 2024 04:52:10 +0000 Subject: [PATCH] update fsl version --- recipes/fsl/build.sh | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/recipes/fsl/build.sh b/recipes/fsl/build.sh index c9ab6ccb..ba680d88 100644 --- a/recipes/fsl/build.sh +++ b/recipes/fsl/build.sh @@ -2,7 +2,7 @@ set -e export toolName='fsl' -export toolVersion='6.0.7.8' +export toolVersion='6.0.7.14' # check for latest version: http://fsl.fmrib.ox.ac.uk/fsldownloads # check if latest version is in neurodocker https://github.com/ReproNim/neurodocker/blob/master/neurodocker/templates/fsl.yaml @@ -37,6 +37,7 @@ yes | neurodocker generate ${neurodocker_buildMode} \ --run="cp /opt/fsl-${toolVersion}/bin/eddy_cuda10.2 /opt/fsl-${toolVersion}/bin/eddy_cuda" \ --copy eddy /opt/fsl-${toolVersion}/bin/eddy \ --run="chmod +x /opt/fsl-${toolVersion}/bin/eddy" \ + --env USER=jovyan \ --copy README.md /README.md \ > ${imageName}.${neurodocker_buildExt}