From 17d49cd184baaf9d0581366636bfd4231d4057a5 Mon Sep 17 00:00:00 2001 From: Fengchao Date: Wed, 24 Jul 2024 15:29:47 -0400 Subject: [PATCH] Add BJXZ amino acids to the amino acid mass list. --- easypqp/convert.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/easypqp/convert.py b/easypqp/convert.py index fc69712..ec821d8 100755 --- a/easypqp/convert.py +++ b/easypqp/convert.py @@ -307,7 +307,7 @@ def get(self): def match_unimod(self, unimod): def match_modifications(um, peptide): monomeric_masses = {"A": 71.03711, "R": 156.10111, "N": 114.04293, "D": 115.02694, "C": 103.00919, "E": 129.04259, "Q": 128.05858, "G": 57.02146, "H": 137.05891, "I": 113.08406, "L": 113.08406, "K": 128.09496, "M": 131.04049, "F": 147.06841, "P": 97.05276, "S": 87.03203, "T": 101.04768, "W": 186.07931, "Y": 163.06333, "V": 99.06841, - 'U': 150.95363, 'O': 237.14773} + 'U': 150.95363, 'O': 237.14773, 'B': 0, 'J': 0, 'X': 0, 'Z': 0} modified_peptide = peptide['peptide_sequence'] # parse terminal modifications