Update manifest and pin newer numpy in containers #444
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As of #405 the presubmit CI is based on package versions listed in the
manifest.yaml
that is committed to the repository. This has not been updated for ~1 month, so the presubmit CI is testing ~1 month old versions of the ecosystem. This PR updates it using the commit from https://github.com/NVIDIA/JAX-Toolbox/tree/znightly-2024-01-03-7395605285, generated by the nightly CI run.Because this bumps the JAX version by ~1 month, we have to include fixes for deprecations. In particular replacing
jax.random.KeyArray
with plainjax.Array
(nvjax-svc-0/t5x@4d5ec2f).The deprecated name is used in older versions of the
chex
package, which are being selected by pip's dependency resolver despite newer versions being available. We avoid this by giving pip a helping hand and nudging it to use a newernumpy
version, which allows it to select a newerchex
. But it's easy to imagine similar issues in future with other packages.Closes #448.