Fix render issues caused by r4ss changes

[iantaylor-NOAA]

What is the feature?

• Render was failing in the recent PR Update _quarto.yml #47 due to changes in the dependent package r4ss.

How have you implemented the solution?

• Changes to petrale, opakapaka and sardine were needed to match new column names used in r4ss discussed in Change column headers within r4ss read/write functions r4ss/r4ss#512.
• A change to the r4ss package was also required to read the ss_new files from github: r4ss/r4ss@36a04d7, so rendering correctly depends on the current version of r4ss on github.

Does the PR impact any other area of the project, maybe another repo?

• No

Additional info

The opakapaka model was reading an RDS file that contained the information on both SS3 inputs (data and control), and SS3 output. The inputs did not work with the modified r4ss, so I've added a read of these files directly from github to replace the ones in the RDS file. In the future, the RDS file could be updated using the current r4ss.

[kellijohnson-NOAA]

Closing because these changes were brought into #47 using git cherry-pick