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Lesson: Working Reproducibly - with minimum overhead #9

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mahesh-panchal opened this issue Nov 3, 2023 · 0 comments
Open

Lesson: Working Reproducibly - with minimum overhead #9

mahesh-panchal opened this issue Nov 3, 2023 · 0 comments

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@mahesh-panchal
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mahesh-panchal commented Nov 3, 2023

  • Organize code, documentation, and data, and work only in that project folder.
  • Codify everything, from fetching databases, how installs were done, to moving files around. Make sure your code connects each data analysis to another
  • Use conda to install tools into environments.
  • Manual modifications e.g. data manipulation in something with a graphical interface, should minimally be tracked using before and after snapshots of the data.
  • Add everything to a github repository at the end.
  • Attach locally installed tools to the repository.
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