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The assembly parameters input file should be formatted like:
hic: - read1: '/path/to/data' read2: '/path/to/data'
but when a user formats the yml like:
hic: - read1: '/path/to/data' - read2: '/path/to/data'
Then the workflow complains about a null input to read2.
null
There is a bash snippet to auto-generate the yml input written into the assembly_parameters.yml, but this can easily be missed.
The text was updated successfully, but these errors were encountered:
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The assembly parameters input file should be formatted like:
but when a user formats the yml like:
Then the workflow complains about a
null
input to read2.There is a bash snippet to auto-generate the yml input written into the assembly_parameters.yml, but this can easily be missed.
The text was updated successfully, but these errors were encountered: