From aa0170b37c105a441129fc3f309f85b30b661a37 Mon Sep 17 00:00:00 2001 From: JulioAPeraza Date: Fri, 4 Aug 2023 12:44:55 -0400 Subject: [PATCH] Create CITATION.cff --- CITATION.cff | 111 +++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 111 insertions(+) create mode 100644 CITATION.cff diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 0000000..bc432d4 --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,111 @@ +cff-version: 1.2.0 + +title: Meta-analytic decoding of the cortical gradient of functional connectivity + +abstract: | + Macroscale gradients have emerged as a central principle for understanding functional brain + organization. Previous studies have demonstrated that a principal gradient of connectivity in + the human brain exists, with unimodal primary sensorimotor regions situated at one end, and + transmodal regions associated with the default mode network and representative of abstract + functioning at the other. The functional significance and interpretation of macroscale gradients + remains a central topic of discussion in the neuroimaging community, with some studies + demonstrating that gradients may be described using meta-analytic functional decoding techniques. + However, additional methodological development is necessary to more fully leverage available + meta-analytic methods and resources and quantitatively evaluate their relative performance. + Here, we conducted a comprehensive series of analyses to investigate and improve the framework + of data-driven, meta-analytic methods, thereby establishing a principled approach for gradient + segmentation and functional decoding. We found that a small number of segments determined by a + K-means segmentation approach and an LDA-based meta-analysis combined with the NeuroQuery + database was the optimal combination of methods for decoding functional connectivity gradients. + Taken together, the current work aims to provide recommendations on best practices, along with + flexible methods, for gradient-based functional decoding of fMRI data. + +message: If you use this code, please cite it as below. + +repository-code: https://github.com/NBCLab/gradient-decoding + +identifiers: + - description: Meta-analytic decoding of the cortical gradient of functional connectivity + type: doi + value: https://doi.org/10.1101/2023.08.01.551505 + +contact: + - given-names: Julio A + family-names: Peraza + email: jperaza@fiu.edu + affiliation: Department of Physics, Florida International University, Miami, FL, USA + +license: Apache License 2.0 + +authors: + - given-names: Julio A + family-names: Peraza + orcid: 0000-0003-3816-5903 + affiliation: Department of Physics, Florida International University, Miami, FL, USA + - given-names: Taylor + family-names: Salo + orcid: 0000-0001-9813-3167 + affiliation: Department of Psychiatry, University of Pennsylvania, Philadelphia, PA, USA + - given-names: Michael C + family-names: Michael + orcid: 0000-0002-1860-4449 + affiliation: LTI Engineering and Software, Quebec City, QC, Canada + - given-names: Katherine L + family-names: Bottenhorn + orcid: 0000-0002-7796-8795 + affiliation: Department of Population and Public Health Sciences, University of Southern California, Los Angeles, CA, USA + - given-names: Jean-Baptiste + family-names: Poline + orcid: 0000-0002-9794-749X + affiliation: Department of Neurology and Neurosurgery, McGill University, Montreal, QC, Canada + - given-names: Jérôme + family-names: Dockès + orcid: 0000-0002-5304-2496 + affiliation: Department of Neurology and Neurosurgery, McGill University, Montreal, QC, Canada + - given-names: James D + family-names: Kent + orcid: 0000-0002-4892-2659 + affiliation: Department of Psychology, University of Texas at Austin, Austin, TX, USA + - given-names: Jessica E + family-names: Bartley + orcid: 0000-0001-7269-9701 + affiliation: Department of Physics, Florida International University, Miami, FL, USA + - given-names: Jessica S + family-names: Flannery + orcid: 0000-0003-3274-1578 + affiliation: Department of Psychology and Neuroscience, University of North Carolina, Chapel Hill, NC, USA + - given-names: Lauren D + family-names: Hill-Bowen + orcid: 0000-0002-9817-7757 + affiliation: Department of Psychology, Florida International University, Miami, FL, USA + - given-names: Rosario + family-names: Pintos Lobo + orcid: 0000-0002-7679-1385 + affiliation: Department of Psychology, Florida International University, Miami, FL, USA + - given-names: Ranjita + family-names: Poudel + orcid: 0000-0003-4343-1153 + affiliation: Department of Health Outcomes and Behavior, Moffitt Cancer Center, Tampa, FL, USA + - given-names: Kimberly L + family-names: Ray + orcid: 0000-0003-1302-2834 + affiliation: Department of Psychology, University of Texas at Austin, Austin, TX, USA + - given-names: Jennifer L + family-names: Robinson + orcid: 0000-0001-7389-3047 + affiliation: Department of Psychology, Auburn University, Auburn, AL, USA + - given-names: Robert W + family-names: Laird + affiliation: Department of Physics, Florida International University, Miami, FL, USA + - given-names: Matthew T + family-names: Sutherland + orcid: 0000-0002-6091-4037 + affiliation: Department of Psychology, Florida International University, Miami, FL, USA + - given-names: Alejandro + family-names: de la Vega + orcid: 0000-0001-9062-3778 + affiliation: Department of Psychology, University of Texas at Austin, Austin, TX, USA + - given-names: Angela R + family-names: Laird + orcid: 0000-0003-3379-8744 + affiliation: Department of Physics, Florida International University, Miami, FL, USA \ No newline at end of file