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From the wonderful MRIcrotome examples I can generate this vertical multi-slice series image:
sliceSeries(nrow=5, ncol=1, begin=25+20, end=298-10, dimension=2) %>% #slice sequence to display stats
anatomy(anatVol, low=1, high=5.9) %>%
overlay(mincArray(model, predictor), # specify which column of the mincLM modellow=round(thresholds["0.05",predictor],digits=2), high=round(thresholds["0.01",predictor],digits=2), symmetric=T, alpha=0.6) %>% # t score range; symmetric = T means show positive and negative t values
sliceSeries(nrow=5, ncol=1, begin=24+15, end=246-10, dimension=1) %>% #slice sequence to display stats
anatomy(anatVol, low=1, high=5.9) %>%
overlay(mincArray(model, predictor), # specify which column of the mincLM modellow=round(thresholds["0.05",predictor],digits=2), high=round(thresholds["0.01",predictor],digits=2), symmetric=T, alpha=0.6) %>% # t score range; symmetric = T means show positive and negative t values
sliceSeries(nrow=5, ncol=1, begin=32+30, end=252-20, dimension=3) %>% #slice sequence to display stats
anatomy(anatVol, low=1, high=5.9) %>%
overlay(mincArray(model, predictor), # specify which column of the mincLM modellow=round(thresholds["0.05",predictor],digits=2), high=round(thresholds["0.01",predictor],digits=2), symmetric=T, alpha=0.6) %>%
legend(predictor) %>%
draw()
However if I switch to "row" layout, swapping row and column count and forcing row with layout="row"
sliceSeries(nrow=1, ncol=5, begin=25+20, end=298-10, dimension=2) %>% #slice sequence to display stats
anatomy(anatVol, low=1, high=5.9) %>%
overlay(mincArray(model, predictor), # specify which column of the mincLM modellow=round(thresholds["0.05",predictor],digits=2), high=round(thresholds["0.01",predictor],digits=2), symmetric=T, alpha=0.6) %>% # t score range; symmetric = T means show positive and negative t values
sliceSeries(nrow=1, ncol=5, begin=24+15, end=246-10, dimension=1) %>% #slice sequence to display stats
anatomy(anatVol, low=1, high=5.9) %>%
overlay(mincArray(model, predictor), # specify which column of the mincLM modellow=round(thresholds["0.05",predictor],digits=2), high=round(thresholds["0.01",predictor],digits=2), symmetric=T, alpha=0.6) %>% # t score range; symmetric = T means show positive and negative t values
sliceSeries(nrow=1, ncol=5, begin=32+30, end=252-20, dimension=3) %>% #slice sequence to display stats
anatomy(anatVol, low=1, high=5.9) %>%
overlay(mincArray(model, predictor), # specify which column of the mincLM modellow=round(thresholds["0.05",predictor],digits=2), high=round(thresholds["0.01",predictor],digits=2), symmetric=T, alpha=0.6) %>%
legend(predictor) %>%
draw(layout="row")
I get a colourbar on just the last sliceseries:
Is it possible to get a global colourbar from this?
The text was updated successfully, but these errors were encountered:
From the wonderful MRIcrotome examples I can generate this vertical multi-slice series image:
However if I switch to "row" layout, swapping row and column count and forcing row with layout="row"
I get a colourbar on just the last sliceseries:
Is it possible to get a global colourbar from this?
The text was updated successfully, but these errors were encountered: