(with --dev): Missing icon in menu-list

[sanjayankur31]

This isn't urgent, but filing it as an FYI.

Building nwb-explorer from source using python utilities/install.py --dev results in an icon missing from the menu list. If the --dev flag is not used, the icon shows up correctly. So, perhaps this indicates some change/bug in the newer/development versions of some underlying components/deps.

= How to reproduce:

Install and run NWBE:

$ git clone [email protected]:MetaCell/nwb-explorer.git
$ cd nwb-explorer
$ git checkout development  #  or master
$ python3.7 -m venv .venv
$ source .venv/bin/activate
$ python --version
Python 3.7.10
$ python utilities/install.py --dev
...
...
$ NWBE

Click on an NWBE file on the landing page, for example Lanore et al.
Notice the missing icon (in the list, under "controls"):

The inspector shows that the fontawesome icon is not correctly included in a class for it to show:

This is what we get on live, for comparison:

This is the difference in Python packages with and without using --dev:

--- withoutdev.txt	2021-04-22 11:53:58.416409778 +0100
+++ withdev.txt	2021-04-22 11:48:45.014457164 +0100
@@ -7,24 +7,33 @@
 attrs==20.3.0
 backcall==0.2.0
 bleach==3.3.0
-cached-property==1.5.2
+bokeh==2.3.1
 cachetools==4.2.1
+ccfwidget==0.5.3
 certifi==2020.12.5
 cffi==1.14.5
 chardet==4.0.0
+cloudpickle==1.6.0
+colorcet==2.0.6
 coverage==5.5
 cycler==0.10.0
+dask==2021.4.0
 decorator==4.4.2
 defusedxml==0.7.1
 Deprecated==1.2.12
 distlib==0.3.1
+-e [email protected]:sanjayankur31/nwb-explorer.git@b06988eceaaf14e8ef30281a8e7751dde01f1b38#egg=nwb_explorer
+-e git+https://github.com/openworm/org.geppetto.frontend.jupyter.git@6742c22070d0cdc3cb370ebb12d8b2f4a103d7ff#egg=jupyter_geppetto
+-e git+https://github.com/openworm/pygeppetto.git@f357319f9bfc751d79837d2cf6d8306432438472#egg=pygeppetto
 entrypoints==0.3
 fasteners==0.16
 filelock==3.0.12
-h5py==3.2.1
-hdmf==1.6.4
+fsspec==2021.4.0
+h5py==2.10.0
+hdmf==2.4.0
+holoviews==1.14.3
 idna==2.10
-imageio==2.5.0
+imageio==2.9.0
 importlib-metadata==4.0.1
 ipydatawidgets==4.2.0
 ipykernel==5.5.3
@@ -32,9 +41,15 @@
 ipysheet==0.4.4
 ipython==7.22.0
 ipython-genutils==0.2.0
+ipytree==0.2.1
 ipyvolume==0.5.2
 ipywebrtc==0.6.0
 ipywidgets==7.6.3
+itk-core==5.2.0
+itk-filtering==5.2.0
+itk-meshtopolydata==0.7.0
+itk-numerics==5.2.0
+itkwidgets==0.32.0
 jedi==0.18.0
 Jinja2==2.11.3
 jsonschema==3.2.0
@@ -42,37 +57,42 @@
 jupyter-client==6.1.12
 jupyter-console==6.4.0
 jupyter-core==4.7.1
-jupyter-geppetto==1.1.1
 jupyterlab-pygments==0.1.2
 jupyterlab-widgets==1.0.0
 kiwisolver==1.3.1
+locket==0.2.1
 lxml==4.6.3
+Markdown==3.3.4
 MarkupSafe==1.1.1
 matplotlib==3.4.1
 mistune==0.8.4
 more-itertools==8.7.0
+msgpack-python==0.5.6
 multimethod==1.5
 nbclient==0.5.3
 nbconvert==6.0.7
 nbformat==5.1.3
 ndx-grayscalevolume==0.0.2
 ndx-icephys-meta==0.1.0
+ndx-spectrum==0.2.2
 nest-asyncio==1.5.1
 networkx==2.5.1
 nose==1.3.7
 notebook==6.3.0
 numcodecs==0.7.3
-numpy==1.20.2
-nwb-explorer==0.6.0
-nwbwidgets==0.4.0
+numpy==1.19.3
+nwbwidgets==0.6.0
 ordered-set==4.0.2
 packaging==20.9
 pandas==1.2.4
 pandocfilters==1.4.3
+panel==0.11.3
+param==1.10.1
 parso==0.8.2
+partd==1.2.0
 pexpect==4.8.0
 pickleshare==0.7.5
-Pillow==7.0.0
+Pillow==8.2.0
 plotly==4.14.3
 pluggy==0.13.1
 prometheus-client==0.10.1
@@ -80,10 +100,10 @@
 ptyprocess==0.7.0
 py==1.10.0
 pycparser==2.20
-pyecore==0.11.6
-pygeppetto==0.8.0
+pyct==0.4.8
+pyecore==0.12.0
 Pygments==2.8.1
-pynwb==1.3.0
+pynwb==1.4.0
 pyparsing==2.4.7
 pyrsistent==0.17.3
 pytest==4.6.2
@@ -91,12 +111,14 @@
 python-dateutil==2.8.1
 pythreejs==2.3.0
 pytz==2021.1
+pyviz-comms==2.0.1
 PyWavelets==1.1.1
+PyYAML==5.4.1
 pyzmq==22.0.3
 qtconsole==5.0.3
 QtPy==1.9.0
-quantities==0.12.3
-redis==2.10.6
+quantities==0.12.4
+redis==3.5.3
 requests==2.25.1
 RestrictedPython==5.1
 retrying==1.3.3
@@ -104,18 +126,20 @@
 ruamel.yaml.clib==0.2.2
 scikit-image==0.18.1
 scipy==1.6.2
-seaborn==0.8.1
+seaborn==0.11.1
 Send2Trash==1.5.0
 six==1.15.0
 terminado==0.9.4
 testpath==0.4.4
 tifffile==2021.4.8
 toml==0.10.2
+toolz==0.11.1
 tornado==6.1
 tox==3.12.1
 tqdm==4.60.0
 traitlets==5.0.5
 traittypes==0.2.1
+trimesh==3.9.14
 typing-extensions==3.7.4.3
 urllib3==1.26.4
 uuid==1.30
@@ -124,5 +148,7 @@
 webencodings==0.5.1
 widgetsnbextension==3.5.1
 wrapt==1.12.1
+xarray==0.17.0
 zarr==2.7.1
 zipp==3.4.1
+zstandard==0.15.2