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<!DOCTYPE html>
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<head>
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<title>Publications</title>
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<h1 class="page-header">Publications
<small></small>
</h1>
</div>
</div>
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<table id="example" class="display" cellspacing="0" width="100%">
<thead>
<tr>
<td>
Author/Title
<br>
<small>* denotes equal author contribution</small>
<br>
<small>^ denotes equal corresponding author contribution</small></td>
<td>
Journal</td>
<td>
Date</td>
<td>
Type</td>
</tr>
</thead>
<tbody>
<tr>
<td>
Lu Y, Truman W, Liu X, Bethke G, Zhou M, Myers C, Katagiri F, Glazebrook J
<br>
<ul class="list-unstyled"><li>
<a href="http://www.plantphysiol.org/content/176/4/3046"> Different Modes of Negative Regulation of Plant Immunity by Calmodulin-Related Genes</a>
</li></ul>
</td>
<td>
Plant Physiology
</td>
<td>
04/2018
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Nelson J, Simpkins S, Safizadeh H, Li S, Piotrowski J, Hirano H, Yashiroda Y, Osada H, Yoshida M, Boone C, Myers C
<br>
<ul class="list-unstyled"><li>
<a href="https://www.biorxiv.org/content/early/2017/08/07/112854"> MOSAIC: a chemical-genetic interaction data repository and web resource for exploring chemical modes of action</a>
</li></ul>
</td>
<td>
BioRxiv
</td>
<td>
08/2017
</td>
<td>
Pre-print
</td>
</tr>
<tr>
<td>
Simpkins S, Nelson J, Deshpande R, Li S, Piotrowski J, Wilson E, Gebre A, Okamoto R, Ohya Y, Osada H, Yoshida M, Boone C,Myers C
<br>
<ul class="list-unstyled"><li>
<a href="https://www.biorxiv.org/content/early/2017/03/01/111252"> Large-scale interpretation of chemical-genetic interaction profiles using a genetic interaction network</a>
</li></ul>
</td>
<td>
BioRxiv
</td>
<td>
03/2017
</td>
<td>
Pre-print
</td>
</tr>
<tr>
<td>
Mechanic L, Lindström S, Daily K, Sieberts S, Amos C, Chen H, Cox N, Dathe M, Feuer E, Guertin M, Hoffman J, Liu Y, Moore J, Myers C, Ritchie M, Schildkraut J, Schumacher F, Witte J, Wang W, Williams S, U4C Challenge Participants , U4C Challenge Data Contributors , Gillanders E
<br>
<ul class="list-unstyled"><li>
<a href="http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006945"> Up For A Challenge (U4C): Stimulating innovation in breast cancer genetic epidemiology</a>
</li></ul>
</td>
<td>
PLOS Genetics
</td>
<td>
11/2017
</td>
<td>
Editorial
</td>
</tr>
<tr>
<td>
Wang W, Xu Z, Costanzo M, Boone C, Lange C, Myers C
<br>
<ul class="list-unstyled"><li>
<a href="http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006973"> Pathway-based discovery of genetic interactions in breast cancer</a>
</li></ul>
</td>
<td>
PLOS Genetics
</td>
<td>
11/2017
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Rizzolo K, Huen J, Kumar A, Phanse S, Vlasblom J, Kakihara Y, Zerineddine H, Minic Z, Snider J, Wang W, Pons C, Seraphim T, Boczek E, Alber S, Costanxo M, Myers C, Stagjar I, Boone C, Houry W
<br>
<ul class="list-unstyled"><li>
<a href="http://www.sciencedirect.com/science/article/pii/S2211124717312160"> Features of the Chaperone Cellular Network Revealed through Systematic Interaction Mapping</a>
</li></ul>
</td>
<td>
Cell Reports
</td>
<td>
11/2017
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Fang G, Wang W, Paunic V, Heydari H, Costanzo M, Liu X, Liu X, Oately B, Steinbach M, Van Ness B, Schadt E, Pankratz N, Boone C, Kumar V, Myers C
<br>
<ul class="list-unstyled"><li>
<a href="https://www.biorxiv.org/content/early/2017/08/30/182741"> Discovering genetic interactions bridging pathways in genome-wide association studies</a>
</li></ul>
</td>
<td>
BioRxiv
</td>
<td>
08/2017
</td>
<td>
Pre-print
</td>
</tr>
<tr>
<td>
M Usaj, Y Tan, W Wang, B VanderSluis, A Zou, CL Myers^, Costanzo M^, Andrews B^, Boone C^
<br>
<ul class="list-unstyled"><li>
<a href="http://www.g3journal.org/content/early/2017/03/20/g3.117.040220"> TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network.</a>
</li></ul>
</td>
<td>
G3: Genes, Genomes, Genetics
</td>
<td>
03/2017
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Piotrowski JS*, Li SC*, Deshpande R*, Simpkins SW*, Nelson J, Yashiroda Y, Barber J, Safizadeh H, Wilson E, Okada H, Gebre A, Kubo K, Torres N, LeBlanc M, Andrusiak K, Okamoto R, Yoshimura M, DeRango-Adem E, van Leeuwn J, Shirahige K, Baryshnikova A, Brown AG, Hirano H, Costanzo M, Andrews B, Ohya Y, Osada H^, Yoshida M^, Myers CL^, Boone C^
<br>
<ul class="list-unstyled"><li>
<a href="http://www.nature.com/nchembio/journal/vaop/ncurrent/full/nchembio.2436">Functional Annotation of Chemical Libraries across Diverse Biological Processes</a>
</li></ul>
</td>
<td>
Nature chemical biology
</td>
<td>
06/2017
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Hillmer RA, Tsuda K, Rallapalli G, Asai S, Truman W, Papke MD, Sakaibara H, Jones JDG, Myers CL, Katagiri F
<br>
<ul class="list-unstyled"><li>
<a href="http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006639">The highly buffered Arabidopsis immune signaling network conceals the functions of its components</a>
</li></ul>
</td>
<td>
Plos Genetics
</td>
<td>
04/2017
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
van Leeuwen J*, Pons C*, Mellor JC, Yamaguchi TN, Friesen H, Koschwanez J, Usaj MM, Pechlaner M, Takar M, Usaj M, VanderSluis B, Andrusiak K, Bansal P, Baryshnikova A, Boone CE, Cao J, Cote A, Gebbia M, Horecka G, Horecka I, Kuzmin E, Legro N, Liang W, van Lieshout N, McNee M, Luis BJS, Shaeri F, Shuteriqi E, Sun S, Yang L, Youn JY, Yuen M, Costanzo M, Gingras AC, Aloy P, Oostenbrink C, Murray A, Graham TR, Myers CL^, Andrews BJ^, Roth FP^, Boone C^
<br>
<ul class="list-unstyled"><li>
<a href="http://science.sciencemag.org/content/354/6312/aag0839">Exploring genetic suppression interactions on a global scale</a>
</li></ul>
</td>
<td>
Science
</td>
<td>
11/2016
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Li L, Briskine R, Schaefer R, Schnable PS, Myers CL, Flagel LE, Springer NM, Muehlbauer GJ
<br>
<ul class="list-unstyled"><li>
<a href="https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-016-3194-0"> Co-expression network analysis of duplicate genes in maize (Zea mays L) reveals no subgenome bias</a>
</li></ul>
</td>
<td>
BMC Genomics
</td>
<td>
10/2016
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Bass JIF, Pons C, Kozlowski L, Reece-Hoyes JS, Shrestha S, Holdorf AD, Mori A, Myers CL, Walhout AJM: A gene-centered C
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5081483/pdf/MSB-12-884.pdf">C. elegans protein-DNA interaction network provides a framework for functional predictions</a>
</li></ul>
</td>
<td>
Mol Syst Biol
</td>
<td>
10/2016
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
M Costanzo*, B VanderSluis*, EN Koch*, A Baryshnikova*, C Pons*, G Tan*, W Wang, M Usaj, J Hanchard, SD Lee, V Pelechano, EB Styles, M Billmann, J van Leeuwen, N van Dyk, ZY Lin, E Kuzmin, J Nelson, JS Piotrowski, T Srikumar, S Bahr, Y Chen, R Deshpande, CF Kurat, SC Li, Z Li, M Mattiazzi Usaj, H Okada, N Pascoe, BJ San Luis, S Sharifpoor, E Shuteriqi, SW Simpkins, J Snider, HG Suresh, Y Tan, H Zhu, N Malod-Dognin, V Janjic, N Przulj, OG Troyanskaya, I Stagljar, T Xia, Y Ohya, AC Gingras, B Raught, M Boutros, LM Steinmetz, CL Moore, AP Rosebrock, AA Caudy, CL Myers^, B Andrews^, C Boone^
<br>
<ul class="list-unstyled"><li>
<a href="http://science.sciencemag.org/content/353/6306/aaf1420"> A global genetic interaction network maps a wiring diagram of cellular function</a>
</li></ul>
</td>
<td>
Science
</td>
<td>
09/2016
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Styles EB, Founk KJ, Zamparo LA, Sing TL, Altintas D, Ribeyre C, Ribaud V, Rougemont J, Mayhew D, Costanzo M, Usaj M, Verster AJ, Koch EN, Novarina D, Graf M, Luke B, Muzi-Falconi M, Myers CL, Mitra RD, Shore D, Brown GW, Zhang Z, Boone C, Andrews BJ
<br>
<ul class="list-unstyled"><li>
<a href="http://www.cell.com/cell-systems/abstract/S2405-4712(16)30263-0?_returnURL=http%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS2405471216302630%3Fshowall%3Dtrue">Exploring Quantitative Yeast Phenomics with Single-Cell Analysis of DNA Damage Foci</a>
</li></ul>
</td>
<td>
Cell Systems
</td>
<td>
09/2016
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Mitra AK, Stessman HAF, Schaefer RJ, Wang W, Myers CL, Van Ness B, Beiraghi S
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4876112/pdf/fgene-07-00088.pdf">Fine-Mapping of 18q2.1 Locus Identifies Single Nucleotide Polymorphisms Associated with Nonsyndromic Cleft Lip with or without Cleft Palate</a>
</li></ul>
</td>
<td>
Frontiers in Genetics
</td>
<td>
05/2016
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Schaefer R, Michno J, Myers CL
<br>
<ul class="list-unstyled"><li>
<a href="http://www.sciencedirect.com/science/article/pii/S1874939916301663"> Unraveling gene function in agricultural species using gene co-expression networks</a>
</li></ul>
</td>
<td>
Biochimica et Biophysica Acta- Gene Regulatory Mechanisms
</td>
<td>
01/2016
</td>
<td>
Review
</td>
</tr>
<tr>
<td>
Dickinson Q, Bottoms S, Hinchman L, McIlwain S, Li S, Myers CL, Boone C, Coon JJ, Hebert A, Sato TK, Landick R, Piotrowski JS
<br>
<ul class="list-unstyled"><li>
<a href="https://microbialcellfactories.biomedcentral.com/articles/10.1186/s12934-016-0417-7"> Mechanism of imidazolium ionic liquids toxicity in Saccharomyces cerevisiae and rational engineering of a tolerant, xylose-fermenting strain</a>
</li></ul>
</td>
<td>
Microb Cell Fact
</td>
<td>
01/2016
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Piotrowski JS, Simpkins SW, Li SC, Deshpande R, McIlwain SJ, Ong IM, Myers CL, Boone C, Andersen RJ
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/25618354"> Chemical genomic profiling via barcode sequencing to predict compound mode of action</a>
</li></ul>
</td>
<td>
Methods Mol Biol
</td>
<td>
12/2015
</td>
<td>
Review
</td>
</tr>
<tr>
<td>
Serate J, Xie D, Pohlmann E, Donald C, Shabani M, Hinchman L, Higbee A, Mcgee M, La Reau A, Klinger GE, Li S, Myers CL, Boone C, Bates DM, Cavalier D, Eilert D, Oates LG, Sanford G, Sato TK, Dale B, Landick R, Piotrowski J, Ong RG, Zhang YP
<br>
<ul class="list-unstyled"><li>
<a href="https://biotechnologyforbiofuels.biomedcentral.com/articles/10.1186/s13068-015-0356-2"> Controlling microbial contamination during hydrolysis of AFEX-pretreated corn stover and switchgrass: effects on hydrolysate composition, microbial response and fermentation</a>
</li></ul>
</td>
<td>
Biotechnology for Biofuels
</td>
<td>
11/2015
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Becker JR, Pons C, Nguyen HD, Costanzo M, Boone C, Myers CL, Bielinsky AK
<br>
<ul class="list-unstyled"><li>
<a href="http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005659"> Genetic Interactions Implicating Postreplicative Repair in Okazaki Fragment Processing</a>
</li></ul>
</td>
<td>
PLoS Genet
</td>
<td>
11/2015
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
LT MacNeil, C Pons, HE Arda, GE Giese, CL Myers, AJM Walhout
<br>
<ul class="list-unstyled"><li>
<a href="http://www.cell.com/cell-systems/abstract/S2405-4712(15)00056-3"> Transcription Factor Activity Mapping of a Tissue-Specific In Vivo Gene Regulatory Network</a>
</li></ul>
</td>
<td>
Cell Systems
</td>
<td>
08/2015
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Piotrowski JS, Okada H, Lu F, Li SC, Hinchman L, Ranjan A, Smith DL, Kigbee AJ, Ulbrich A, Coon JJ, Deshpande R, Bukhman YV, McIlwain S, Ong IM, Myers CL, Boone C, Landick R, Ralph J, Kabbage M, Ohya Y
<br>
<ul class="list-unstyled"><li>
<a href="http://www.pnas.org/content/112/12/E1490"> Plant-derived antifungal agent poacic acid targets β-1,3-glucan</a>
</li></ul>
</td>
<td>
PNAS
</td>
<td>
02/2015
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Pons C, Costanzo M, Boone C, Myers CL
<br>
<ul class="list-unstyled"><li>
<a href="http://www.cambridge.org/catalogue/catalogue.asp?isbn=1107013844"> Systems Genetics - linking genotypes and phenotypes: Computational paradigms for analyzing genetic interaction networks</a>
</li></ul>
</td>
<td>
Cambridge University Press
</td>
<td>
10/2015
</td>
<td>
Book
</td>
</tr>
<tr>
<td>
Abbey DA, Funt J, Lurie-Weinberger MN, Thompson DA, Regev A, Myers CL, Berman J
<br>
<ul class="list-unstyled"><li>
<a href="https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-014-0100-8"> YMAP: a pipeline for visualization of copy number variation and loss of heterozygosity in eukaryotic pathogens</a>
</li></ul>
</td>
<td>
Genome Medicine
</td>
<td>
11/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Brown JCS, Nelson J, VanderSluis B, Desphande R, Butts A, Kagan S, Polacheck I, Krysan DJ, Myers CL^, Madhani HD^
<br>
<ul class="list-unstyled"><li>
<a href="http://www.cell.com/cell/abstract/S0092-8674(14)01371-3?_returnURL=http%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867414013713%3Fshowall%3Dtrue"> Unraveling the biology of a fungal meningitis pathogen using chemical genetics</a>
</li></ul>
</td>
<td>
Cell
</td>
<td>
10/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Wyche TP, Piotrowski JS, Hou Y, Braun D, Deshpande R, McIlwain S, Ong IM, Myers CL, Guzei IA, Westler WA, Andes DR, Bugni, TS Forazoline A
<br>
<ul class="list-unstyled"><li>
<a href="http://onlinelibrary.wiley.com/doi/10.1002/ange.201405990/full">Marine‐Derived Polyketide with Antifungal In Vivo Efficacy</a>
</li></ul>
</td>
<td>
Angewandte Chemie
</td>
<td>
09/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Stessman HAF, Lulla A, Xia T, Mitra A, Harding T, Mansoor A, Myers CL, Van Ness BG, Dolloff NG
<br>
<ul class="list-unstyled"><li>
<a href="http://www.nature.com/leu/journal/v28/n11/full/leu2014214a.html"> High-throughput drug screening identifies compounds and molecular strategies for targeting proteasome inhibitor-resistant multiple myeloma</a>
</li></ul>
</td>
<td>
Leukemia
</td>
<td>
07/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
DiPrima S, Haarer B, Viggiano S, Pons C, Myers CL, Amberg DC
<br>
<ul class="list-unstyled"><li>
<a href="http://www.g3journal.org/content/4/8/1491.long"> Linking genetics to structural biology: complex heterozygosity screening with actin alanine scan alleles identifies functionally related surfaces on yeast actin</a>
</li></ul>
</td>
<td>
G3
</td>
<td>
08/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Schaefer RJ, Briskine R, Springer NM, Myers CL^
<br>
<ul class="list-unstyled"><li>
<a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0099193"> Discovering functional modules across diverse maize transcriptomes using COB, the Co-Expression Browser</a>
</li></ul>
</td>
<td>
PLoS ONE
</td>
<td>
06/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Bansal M, Yang J, Karan C, Menden MP, Costello JC, Tang H, Xiao G, Li Y, Allen J, Zhong R, Chen B, Kim M, Wang T, Heiser LM, Realubit R, Mattioli M, Alvarez MJ, Shen Y, NCI-DREAM Community, Gallahan D, Singer D, Saez-Rodriguez J, Xie Y, Stolovitzky G, Califano A
<br>
<ul class="list-unstyled"><li>
<a href="http://www.nature.com/nbt/journal/v32/n12/full/nbt.3052.html"> A community computational challenge to predict the activity of pairs of compounds</a>
</li></ul>
</td>
<td>
Nat Biotechnol
</td>
<td>
09/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Costello JC, Heiser LM, Georgii E, Gönen M, Menden MP, Wang NJ, Bansal M, Ammad-Ud-Din M, Hintsanen P, Khan SA, Mpindi JP, Kallioniemi O, Honkela A, Aittokallio T, Wennerberg K, NCI DREAM Community, Collins JJ, Gallahan D, Singer D, Saez-Rodriguez J, Kaski S, Gray JW, Stolovitzky G
<br>
<ul class="list-unstyled"><li>
<a href="http://www.nature.com/nbt/journal/v32/n12/full/nbt.2877.html"> A community effort to assess and improve drug sensitivity prediction algorithms</a>
</li></ul>
</td>
<td>
Nat Biotechnol
</td>
<td>
06/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
VanderSluis B*, Hess DC*, Pesyna C, Krumholz E, Syed T, Szappanos B, Nislow C, Troyanskaya OG, Myers CL^, Caudy AA^
<br>
<ul class="list-unstyled"><li>
<a href="https://genomebiology.biomedcentral.com/articles/10.1186/gb-2014-15-4-r64"> Broad metabolic sensitivity profiling of a prototrophic yeast deletion collection</a>
</li></ul>
</td>
<td>
Genome Biology
</td>
<td>
04/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Kim Y, Tsuda K, Igarashi D, Hillmer RA, Sakakibara H, Myers CL, Katagiri F
<br>
<ul class="list-unstyled"><li>
<a href="http://www.cell.com/cell-host-microbe/abstract/S1931-3128(13)00435-6"> Mechanisms underlying robustness and tunability in a plant immune signaling network</a>
</li></ul>
</td>
<td>
Cell Host & Microbe
</td>
<td>
01/2014
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Fuxman Bass JI, Diallo A, Nelson J, Soto JM, Myers CL, Walhout AJM
<br>
<ul class="list-unstyled"><li>
<a href="http://www.nature.com/nmeth/journal/v10/n12/full/nmeth.2728.html"> Using networks to measure similarity between genes: association index selection</a>
</li></ul>
</td>
<td>
Nature Methods
</td>
<td>
11/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Fung SY, Sofiyev V, Schneiderman J, Hirschfeld AF, Victor RE, Woods K, Piotrowski JS, Deshpande R, Li SC, de Voogd NJ, Myers CL, Boone B, Andersen RJ, Turvey SE
<br>
<ul class="list-unstyled"><li>
<a href="http://pubs.acs.org/doi/abs/10.1021/cb400740c"> Unbiased Screening of Marine Sponge Extracts for Anti-inflammatory Agents Combined with Chemical Genomics Identifies Girolline as an Inhibitor of Protein Synthesis</a>
</li></ul>
</td>
<td>
ACS Chemical Biology
</td>
<td>
10/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Baryshnikova A, Vandersluis B, Costanzo M, Myers CL, Cha RS, Andrews B, Boone C
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/23979930"> Global Linkage Map Connects Meiotic Centromere Function to Chromosome Size in Budding Yeast</a>
</li></ul>
</td>
<td>
G3
</td>
<td>
10/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Eichten SR, Briskine R, Song J, Li Q, Swanson-Wagner R, Hermanson PJ, Waters AJ, Starr E, West PT, Tiffin P, Myers CL, Vaughn MW, Springer NM
<br>
<ul class="list-unstyled"><li>
<a href="http://www.plantcell.org/content/early/2013/08/02/tpc.113.114793.full.pdf+html"> Epigenetic and Genetic Influences on DNA Methylation Variation in Maize Populations</a>
</li></ul>
</td>
<td>
Plant Cell
</td>
<td>
08/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Deshpande R*, Asiedu M*, Klebig M, Sutor S, Kuzmin E, Nelson J, Piotrowski J, Shin SH, Yoshida M, Costanzo M, Boone C, Wigle DA^, Myers CL^
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/23980094"> A comparative genomic approach for identifying synthetic lethal interactions in human cancer</a>
</li></ul>
</td>
<td>
Cancer Research
</td>
<td>
08/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Deshpande R, VanderSluis B, Myers CL
<br>
<ul class="list-unstyled"><li>
<a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0068664"> Comparison of profile similarity measures for genetic interaction networks</a>
</li></ul>
</td>
<td>
PLoS ONE
</td>
<td>
07/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Stessman HA, Baughn LB, Sarver A, Xia T, Deshpande R, Mansoor A, Linden MA, Doloff N, Janz S, Myers CL, Van Ness B
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/23536725"> Profiling bortezomib resistance and identification of secondary therapies in a mouse myeloma model</a>
</li></ul>
</td>
<td>
Mol Cancer Ther
</td>
<td>
06/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Nguyen HD, Becker J, Thu YM, Costanzo M, Koch EN, Smith S, Myung K, Myers CL, Boone C, Bielinsky AK
<br>
<ul class="list-unstyled"><li>
<a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0066379"> Unligated Okazaki Fragments Induce PCNA Ubiquitination and a Requirement for Rad59-Dependent Replication Fork Progression</a>
</li></ul>
</td>
<td>
PLoS ONE
</td>
<td>
06/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Reece-Hoyes JS*, Pons C*, Diallo A, Mori A, Shrestha S, Kadreppa S, Nelson J, Diprima S, Dricot A, Lajoie BR, Ribeiro PS, Weirauch MT, Hill DE, Hughes TR, Myers CL^, Walhout AJ^
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/23791784"> Extensive Rewiring and Complex Evolutionary Dynamics in a C elegans Multiparameter Transcription Factor Network</a>
</li></ul>
</td>
<td>
Mol Cell
</td>
<td>
06/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
A Baryshnikova, M Costanzo, CL Myers, B Andrews, C Boone
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/23808365"> Genetic Interaction Networks: Toward an Understanding of Heritability</a>
</li></ul>
</td>
<td>
Annual Review of Genomics and Human Genetics
</td>
<td>
06/2013
</td>
<td>
Review
</td>
</tr>
<tr>
<td>
Wagih O, Usaj M, Baryshnikova A, VanderSluis B, Kuzmin E, Costanzo M, Myers CL, Andrews BJ, Boone CM, Parts L
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/23677617"> SGAtools: one-stop analysis and visualization of array-based genetic interaction screens</a>
</li></ul>
</td>
<td>
Nucleic Acids Research
</td>
<td>
05/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Colak R, Kim T, Michaut M, Sun M, Irimia M, Bellay J, Myers CL, Blencowe BJ, Kim PM
<br>
<ul class="list-unstyled"><li>
<a href="http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1003030"> Distinct Types of Disorder in the Human Proteome: Functional Implications for Alternative Splicing</a>
</li></ul>
</td>
<td>
PLoS Comput Biol
</td>
<td>
04/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Sekhon RS, Briskine R, Hirsch CN, Myers CL, Springer NM, Buell CR, de Leon N, Kaeppler SM
<br>
<ul class="list-unstyled"><li>
<a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0061005"> Maize Gene Atlas Developed by RNA Sequencing and Comparative Evaluation of Transcriptomes Based on RNA Sequencing and Microarrays</a>
</li></ul>
</td>
<td>
PLoS ONE
</td>
<td>
04/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Alver B, Jauert PA, Brosnan L, O’Hehir M, VanderSluis B, Myers CL, Kirkpatrick DT
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/23550123"> A whole genome screen for minisatellite stability genes in stationary phase yeast cells</a>
</li></ul>
</td>
<td>
G3
</td>
<td>
04/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Makarevitch I, Eichten SR, Briskine R, Danilevskaya ON, Meeley RB, Myers CL, Vaughn MW, Springer NM
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/23463775"> Genomic distribution of maize facultative heterochromatin marked by trimethylation of H3K27</a>
</li></ul>
</td>
<td>
Plant Cell
</td>
<td>
03/2013
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Koch E, Costanzo M, Bellay J, Deshpande R, Chatfield-Reed K, Chua G, D’Urso G, Andrews B, Boone C, Myers CL
<br>
<ul class="list-unstyled"><li>
<a href="https://genomebiology.biomedcentral.com/articles/10.1186/gb-2012-13-7-r57"> Conserved rules govern genetic interaction degree across species</a>
</li></ul>
</td>
<td>
Genome Biol
</td>
<td>
07/2012
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Swanson-Wagner R*, Briskine R*, Schaefer R, Hufford MB, Ross-Ibarra J, Myers CL, Tiffin P, Springer NM
<br>
<ul class="list-unstyled"><li>
<a href="http://www.pnas.org/content/109/29/11878.abstract"> Reshaping of the maize transcriptome by domestication</a>
</li></ul>
</td>
<td>
Proc Natl Acad Sci
</td>
<td>
06/2012
</td>
<td>
Article
</td>
</tr>
<tr>
<td>
Davidson MB, Katou Y, Keszthelyi A, Sing TL, Xia T, Ou J, Vaisica JA, Thevakumaran N, Marjavaara L, Myers CL, Chabes A, Shirahige K, Brown GW
<br>
<ul class="list-unstyled"><li>
<a href="https://www.ncbi.nlm.nih.gov/pubmed/22234187"> Endogenous DNA replication stress results in expansion of dNTP pools and a mutator phenotype</a>
</li></ul>
</td>
<td>
EMBO J