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The sort order is correct for col4 (i.e. descending counts) and col1 (fixed row number).
Col 2 should be the index number of the sort (so... it should be the original unsorted k-mer id, since sort order is descending by count, not by id.) Indeed it seems
col 3 should be just the k-mer id. (e.g. row 0 below: it should read [0, 65523, 65523, 1977, ...]
The sort order is correct for col4 (i.e. descending counts) and col1 (fixed row number).
Col 2 should be the index number of the sort (so... it should be the original unsorted k-mer id, since sort order is descending by count, not by id.) Indeed it seems
col 3 should be just the k-mer id. (e.g. row 0 below: it should read [0, 65523, 65523, 1977, ...]
Upon inspection, row 3 sort order is mangled.
Suggestion: remove col 3 so new column order is
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