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add xbg classifier Run tests #45: Commit 81dc6f3 pushed by vemonet
December 7, 2023 12:28 17m 34s main
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December 7, 2023 12:28 17m 34s
small change Run tests #44: Commit 5c1ea02 pushed by vemonet
December 7, 2023 12:17 16m 46s main
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December 7, 2023 12:17 16m 46s
no sim Run tests #43: Commit ab4d621 pushed by vemonet
November 28, 2023 16:17 17m 25s main
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November 28, 2023 16:17 17m 25s
chnge max len target embed Run tests #42: Commit 2a81e7b pushed by vemonet
November 28, 2023 07:44 17m 13s main
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November 28, 2023 07:44 17m 13s
use cosine distance instead of dot Run tests #41: Commit 4bea206 pushed by vemonet
November 27, 2023 09:23 17m 21s main
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November 27, 2023 09:23 17m 21s
fix opentargets training and run a complete training Run tests #40: Commit 5f0d634 pushed by vemonet
November 10, 2023 13:54 27m 7s main
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November 10, 2023 13:54 27m 7s
cleanup training Run tests #39: Commit ded759f pushed by vemonet
November 9, 2023 12:22 27m 15s main
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November 9, 2023 12:22 27m 15s
Move unused files to archive folder Run tests #38: Commit 57e84e5 pushed by vemonet
November 9, 2023 12:12 28m 1s main
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November 9, 2023 12:12 28m 1s
add notebook for getting similarity vectors score Run tests #37: Commit cfd91a4 pushed by vemonet
November 9, 2023 12:08 18m 17s main
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November 9, 2023 12:08 18m 17s
stop generating target embeddings in bulk due to crash when running o… Run tests #36: Commit 0d86525 pushed by vemonet
November 7, 2023 16:39 18m 7s main
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November 7, 2023 16:39 18m 7s
run drug-target embedding computing in parallel Run tests #35: Commit 712cbea pushed by vemonet
October 24, 2023 13:21 32m 22s main
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October 24, 2023 13:21 32m 22s
improve training of opentargets Run tests #34: Commit f2d7e25 pushed by vemonet
October 24, 2023 12:57 35m 20s main
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October 24, 2023 12:57 35m 20s
add CLI for training Run tests #33: Commit 07e1c85 pushed by vemonet
October 24, 2023 07:43 32m 14s main
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October 24, 2023 07:43 32m 14s
cleanup, rename vars, remove function normalize_id_to_translator Run tests #32: Commit 38267fe pushed by vemonet
October 24, 2023 06:56 33m 49s main
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October 24, 2023 06:56 33m 49s
refactor train to create a reusable function for training Run tests #31: Commit 265714b pushed by vemonet
October 24, 2023 06:21 37m 13s main
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October 24, 2023 06:21 37m 13s
Add vectors per batch to vectordb Run tests #30: Commit 491f309 pushed by vemonet
October 24, 2023 05:41 30m 55s main
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October 24, 2023 05:41 30m 55s
add script to compute opentarget embeddings Run tests #29: Commit e4bf1b4 pushed by vemonet
October 23, 2023 19:06 27m 54s main
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October 23, 2023 19:06 27m 54s
Improve embeddings computing to check for pref ID smiles/seq Run tests #28: Commit ad4e844 pushed by vemonet
October 23, 2023 18:52 28m 20s main
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October 23, 2023 18:52 28m 20s
retrieve first smiles from chembl, check pubchem only if chembl fails Run tests #27: Commit 6faa170 pushed by vemonet
October 23, 2023 15:01 34m 34s main
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October 23, 2023 15:01 34m 34s
convert chembl/ensembl to pubchem/uniprot before gettings smiles Run tests #26: Commit 4fa285c pushed by vemonet
October 23, 2023 13:43 28m 10s main
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October 23, 2023 13:43 28m 10s
improve prepare_opentargets Run tests #25: Commit 4d79315 pushed by vemonet
October 20, 2023 07:51 27m 42s main
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October 20, 2023 07:51 27m 42s
Improve chembl ID to smiles and logging Run tests #24: Commit c034e78 pushed by vemonet
October 19, 2023 15:55 27m 11s main
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October 19, 2023 15:55 27m 11s
rename some files Run tests #23: Commit e6b2dfa pushed by vemonet
October 19, 2023 15:16 28m 42s main
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October 19, 2023 15:16 28m 42s
fix print Run tests #22: Commit af910d8 pushed by vemonet
October 19, 2023 14:51 28m 2s main
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October 19, 2023 14:51 28m 2s
fix import Run tests #21: Commit 78c5de6 pushed by vemonet
October 19, 2023 14:25 29m 50s main
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October 19, 2023 14:25 29m 50s