fix airlock

MaastrichtU-IDS · Apr 11, 2024 · 1d1663e · 1d1663e
1 parent 4ff898d
commit 1d1663e
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Showing 2 changed files with 1 addition and 4 deletions.
diff --git a/backend/src/upload.py b/backend/src/upload.py
@@ -196,7 +196,6 @@ def load_cohort_dict_file(dict_path: str, cohort_id: str, airlock: bool) -> Data
         )
     try:
         df = pd.read_csv(dict_path)
-        # df = pd.read_csv(dict_path, encoding="utf-8")
         df = df.dropna(how="all")
         df = df.fillna("")
         df.columns = df.columns.str.strip()
@@ -366,9 +365,7 @@ async def upload_cohort(
         os.remove(metadata_path)
         raise e
 
-    print("Cohort metadata uploaded successfully")
     cohorts_dict = retrieve_cohorts_metadata(user["email"])
-    print("Cohort metadata retrieved successfully")
     try:
         dcr_data = create_provision_dcr(user, cohorts_dict.get(cohort_id))
     except Exception as e:

diff --git a/backend/src/utils.py b/backend/src/utils.py
@@ -39,7 +39,7 @@ def run_query(query: str) -> dict[str, Any]:
 PREFIX dcterms: <http://purl.org/dc/terms/>
 
 SELECT DISTINCT ?cohortId ?cohortInstitution ?cohortType ?cohortEmail ?study_type ?study_participants
-    ?study_duration ?study_ongoing ?study_population ?study_objective
+    ?study_duration ?study_ongoing ?study_population ?study_objective ?airlock
     ?variable ?varName ?varLabel ?varType ?index ?count ?na ?max ?min ?units ?formula ?definition
     ?omopDomain ?conceptId ?mappedId ?mappedLabel ?visits ?categoryValue ?categoryLabel ?categoryMappedId ?categoryMappedLabel
 WHERE {