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<!doctype html>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta content="Summary of changes, new features, and bug fixes for each MIRTK release." name="description" />
<title>Release Notes — MIRTK</title>
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<h3><a href="sidebar.html">Table Of Contents</a></h3>
<ul>
<li class="toctree-l1"><a class="reference internal" href="index.html">Overview</a></li>
<li class="toctree-l1"><a class="reference internal" href="getstarted.html">Get Started</a></li>
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<li class="toctree-l1 current"><a class="current reference internal" href="#">News</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#id1">2018</a><ul>
<li class="toctree-l3"><a class="reference internal" href="#release-2-0-0-apr-8">Release 2.0.0 (Apr 8)</a></li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="#id2">2016</a><ul>
<li class="toctree-l3"><a class="reference internal" href="#release-1-1-0-apr-21">Release 1.1.0 (Apr 21)</a></li>
<li class="toctree-l3"><a class="reference internal" href="#release-1-0-0-jan-15">Release 1.0.0 (Jan 15)</a></li>
<li class="toctree-l3"><a class="reference internal" href="#release-1-0rc2-jan-13">Release 1.0rc2 (Jan 13)</a></li>
<li class="toctree-l3"><a class="reference internal" href="#release-1-0rc1-jan-10">Release 1.0rc1 (Jan 10)</a></li>
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<div class="section" id="release-notes">
<h1>Release Notes<a class="headerlink" href="#release-notes" title="Permalink to this headline">¶</a></h1>
<div class="section" id="id1">
<h2>2018<a class="headerlink" href="#id1" title="Permalink to this headline">¶</a></h2>
<div class="section" id="release-2-0-0-apr-8">
<span id="v2-0-0"></span><h3>Release 2.0.0 (Apr 8)<a class="headerlink" href="#release-2-0-0-apr-8" title="Permalink to this headline">¶</a></h3>
<p>This major release reflects the version used in the experiments of the PhD thesis of Andreas Schuh,
including in particular the spatio-temporal atlas construction following the approach detailed in the preprint
of Schuh et al., “Unbiased construction of a temporally consistent morphological atlas of neonatal brain development”,
bioRXiv, <a class="reference external" href="https://doi.org/10.1101/251512">doi:10.1101/251512</a>.</p>
<p>Note that the change of the image dissimilarity scaling requires different choices of regularization weights, e.g.,
the “Bending energy weight”, when compared to previous versions. Therefore the major version number has been increased.</p>
<ul class="simple">
<li>Changed scaling of image dissimilarity gradient.</li>
<li>Additional Linear Energy constraint for deformable registration.</li>
<li>Groupwise spatio-temporal atlas construction.</li>
<li>Enable build with VTK 8.</li>
<li>Provide AppImage for easy installation on Linux.</li>
<li>Added <code class="docutils literal"><span class="pre">match-histogram</span></code> command.</li>
<li>For a more detailed list of changes, see <a class="reference external" href="https://github.com/BioMedIA/MIRTK/pull/652">PR 652</a>.</li>
</ul>
</div>
</div>
<div class="section" id="id2">
<h2>2016<a class="headerlink" href="#id2" title="Permalink to this headline">¶</a></h2>
<div class="section" id="release-1-1-0-apr-21">
<span id="v1-1-0"></span><h3>Release 1.1.0 (Apr 21)<a class="headerlink" href="#release-1-1-0-apr-21" title="Permalink to this headline">¶</a></h3>
<ul class="simple">
<li>Use <a class="reference external" href="http://cmake-basis.github.io/changelog.html#release-3-3-0-apr-19-2016">CMake BASIS Modules 3.3.0</a>.</li>
<li>Fixed build with VTK 7.</li>
<li>Fixed Python scripts to run with both Python 2 and 3.</li>
<li>Fixed Visual Studio build warnings and errors.</li>
<li>Enabled build as shared libraries on Windows.</li>
<li>Renamed <code class="docutils literal"><span class="pre">Image</span> <span class="pre">I/O</span></code> module to <a class="reference internal" href="modules/io.html"><span class="doc">I/O</span></a>.</li>
<li>Read/Write both NIfTI-1 and NIfTI-2 image files.</li>
<li>Read/Write point sets and surfaces from GIFTI files.</li>
<li>Always save binary files in big-endian order.</li>
<li>Added Python package for execution of MIRTK commands.</li>
<li>Provide Docker image with MIRTK installation.</li>
<li>Refactored Applications module.</li>
<li>Various minor fixes of commands.</li>
</ul>
</div>
<div class="section" id="release-1-0-0-jan-15">
<span id="v1-0-0"></span><h3>Release 1.0.0 (Jan 15)<a class="headerlink" href="#release-1-0-0-jan-15" title="Permalink to this headline">¶</a></h3>
<ul class="simple">
<li>First stable release of the refactored IRTK support libraries and new <a class="reference internal" href="modules/registration.html"><span class="doc">Registration framework</span></a>.</li>
<li>Includes extension packages for <a class="reference internal" href="modules/mapping.html"><span class="doc">volumetric mapping</span></a> and a <a class="reference internal" href="modules/deformable.html"><span class="doc">deformable surface framework</span></a>.</li>
</ul>
</div>
<div class="section" id="release-1-0rc2-jan-13">
<span id="v1-0rc2"></span><h3>Release 1.0rc2 (Jan 13)<a class="headerlink" href="#release-1-0rc2-jan-13" title="Permalink to this headline">¶</a></h3>
<ul class="simple">
<li>Refactored initialization of object factories, GNU g++ on Ubuntu excludes unused shared libraries.</li>
<li>Use <code class="docutils literal"><span class="pre">::</span></code> as CMake target namespace separator.</li>
<li>Moved image I/O classes to new <a class="reference internal" href="modules/io.html"><span class="doc">Image I/O</span></a> module.</li>
<li>Build libLBFGS source files as part of <a class="reference internal" href="modules/numerics.html"><span class="doc">Numerics</span></a> module.</li>
<li>Build NIfTI C Library as part of Image I/O module.</li>
</ul>
</div>
<div class="section" id="release-1-0rc1-jan-10">
<span id="v1-0rc1"></span><h3>Release 1.0rc1 (Jan 10)<a class="headerlink" href="#release-1-0rc1-jan-10" title="Permalink to this headline">¶</a></h3>
<ul class="simple">
<li>Initial release candidate.</li>
<li>Most functionality available, but with some recent untested advanced features.</li>
<li>Please report any issues on GitHub (see <a class="reference internal" href="help.html"><span class="doc">Support</span></a>).</li>
</ul>
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© Copyright 2013-2018 Imperial College London, Andreas Schuh.
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