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<!DOCTYPE html>
<html lang="" xml:lang="">
<head>
<title>Presentation Title</title>
<meta charset="utf-8" />
<meta name="date" content="2021-10-01" />
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<textarea id="source">
class: top, title
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.left-col-narrow[.center[
<br>
<!--inserting the IWDBA logo that links to the IWDC 2021 page-->
<a href="https://www.iwdba.org/event/iwdc-2021/"><img src="img/iwdbaLogo.png" alt="International Working Dog Breeding Association" width="80%"/></a>
.titleConf[Conference Name]
]]
.right-col-wide[
.left[
# Presentation Title
<!--inserting a horizontal bar for aesthetic appeal -->
----
]]
.titleAuthor[
Liz Hare, PhD<br>@DogGeneticsLLC <svg aria-label="Twitter" role="img" viewBox="0 0 512 512" style="height:1em;width:1em;vertical-align:-0.125em;margin-left:auto;margin-right:auto;font-size:inherit;fill:currentColor;overflow:visible;position:relative;"><title>Twitter</title><path d="M459.37 151.716c.325 4.548.325 9.097.325 13.645 0 138.72-105.583 298.558-298.558 298.558-59.452 0-114.68-17.219-161.137-47.106 8.447.974 16.568 1.299 25.34 1.299 49.055 0 94.213-16.568 130.274-44.832-46.132-.975-84.792-31.188-98.112-72.772 6.498.974 12.995 1.624 19.818 1.624 9.421 0 18.843-1.3 27.614-3.573-48.081-9.747-84.143-51.98-84.143-102.985v-1.299c13.969 7.797 30.214 12.67 47.431 13.319-28.264-18.843-46.781-51.005-46.781-87.391 0-19.492 5.197-37.36 14.294-52.954 51.655 63.675 129.3 105.258 216.365 109.807-1.624-7.797-2.599-15.918-2.599-24.04 0-57.828 46.782-104.934 104.934-104.934 30.213 0 57.502 12.67 76.67 33.137 23.715-4.548 46.456-13.32 66.599-25.34-7.798 24.366-24.366 44.833-46.132 57.827 21.117-2.273 41.584-8.122 60.426-16.243-14.292 20.791-32.161 39.308-52.628 54.253z"/></svg>
]
---
class: bottom, center
.pull-left[
<img style="border-radius: 50%;"
src="img/Profile_LH.jpg"
alt=""
width="250px"
/>
# Liz Hare, PhD
[<svg aria-label="Link" role="img" viewBox="0 0 512 512" style="height:1em;width:1em;vertical-align:-0.125em;margin-left:auto;margin-right:auto;font-size:inherit;fill:currentColor;overflow:visible;position:relative;"><title>Link</title><path d="M326.612 185.391c59.747 59.809 58.927 155.698.36 214.59-.11.12-.24.25-.36.37l-67.2 67.2c-59.27 59.27-155.699 59.262-214.96 0-59.27-59.26-59.27-155.7 0-214.96l37.106-37.106c9.84-9.84 26.786-3.3 27.294 10.606.648 17.722 3.826 35.527 9.69 52.721 1.986 5.822.567 12.262-3.783 16.612l-13.087 13.087c-28.026 28.026-28.905 73.66-1.155 101.96 28.024 28.579 74.086 28.749 102.325.51l67.2-67.19c28.191-28.191 28.073-73.757 0-101.83-3.701-3.694-7.429-6.564-10.341-8.569a16.037 16.037 0 0 1-6.947-12.606c-.396-10.567 3.348-21.456 11.698-29.806l21.054-21.055c5.521-5.521 14.182-6.199 20.584-1.731a152.482 152.482 0 0 1 20.522 17.197zM467.547 44.449c-59.261-59.262-155.69-59.27-214.96 0l-67.2 67.2c-.12.12-.25.25-.36.37-58.566 58.892-59.387 154.781.36 214.59a152.454 152.454 0 0 0 20.521 17.196c6.402 4.468 15.064 3.789 20.584-1.731l21.054-21.055c8.35-8.35 12.094-19.239 11.698-29.806a16.037 16.037 0 0 0-6.947-12.606c-2.912-2.005-6.64-4.875-10.341-8.569-28.073-28.073-28.191-73.639 0-101.83l67.2-67.19c28.239-28.239 74.3-28.069 102.325.51 27.75 28.3 26.872 73.934-1.155 101.96l-13.087 13.087c-4.35 4.35-5.769 10.79-3.783 16.612 5.864 17.194 9.042 34.999 9.69 52.721.509 13.906 17.454 20.446 27.294 10.606l37.106-37.106c59.271-59.259 59.271-155.699.001-214.959z"/></svg> doggenetics.com](http://doggenetics.com/)<br>
[<svg aria-label="Twitter" role="img" viewBox="0 0 512 512" style="height:1em;width:1em;vertical-align:-0.125em;margin-left:auto;margin-right:auto;font-size:inherit;fill:currentColor;overflow:visible;position:relative;"><title>Twitter</title><path d="M459.37 151.716c.325 4.548.325 9.097.325 13.645 0 138.72-105.583 298.558-298.558 298.558-59.452 0-114.68-17.219-161.137-47.106 8.447.974 16.568 1.299 25.34 1.299 49.055 0 94.213-16.568 130.274-44.832-46.132-.975-84.792-31.188-98.112-72.772 6.498.974 12.995 1.624 19.818 1.624 9.421 0 18.843-1.3 27.614-3.573-48.081-9.747-84.143-51.98-84.143-102.985v-1.299c13.969 7.797 30.214 12.67 47.431 13.319-28.264-18.843-46.781-51.005-46.781-87.391 0-19.492 5.197-37.36 14.294-52.954 51.655 63.675 129.3 105.258 216.365 109.807-1.624-7.797-2.599-15.918-2.599-24.04 0-57.828 46.782-104.934 104.934-104.934 30.213 0 57.502 12.67 76.67 33.137 23.715-4.548 46.456-13.32 66.599-25.34-7.798 24.366-24.366 44.833-46.132 57.827 21.117-2.273 41.584-8.122 60.426-16.243-14.292 20.791-32.161 39.308-52.628 54.253z"/></svg> @DogGeneticsLLC](https://twitter.com/DogGeneticsLLC)<br>
[<svg aria-label="GitHub" role="img" viewBox="0 0 496 512" style="height:1em;width:0.97em;vertical-align:-0.125em;margin-left:auto;margin-right:auto;font-size:inherit;fill:currentColor;overflow:visible;position:relative;"><title>GitHub</title><path d="M165.9 397.4c0 2-2.3 3.6-5.2 3.6-3.3.3-5.6-1.3-5.6-3.6 0-2 2.3-3.6 5.2-3.6 3-.3 5.6 1.3 5.6 3.6zm-31.1-4.5c-.7 2 1.3 4.3 4.3 4.9 2.6 1 5.6 0 6.2-2s-1.3-4.3-4.3-5.2c-2.6-.7-5.5.3-6.2 2.3zm44.2-1.7c-2.9.7-4.9 2.6-4.6 4.9.3 2 2.9 3.3 5.9 2.6 2.9-.7 4.9-2.6 4.6-4.6-.3-1.9-3-3.2-5.9-2.9zM244.8 8C106.1 8 0 113.3 0 252c0 110.9 69.8 205.8 169.5 239.2 12.8 2.3 17.3-5.6 17.3-12.1 0-6.2-.3-40.4-.3-61.4 0 0-70 15-84.7-29.8 0 0-11.4-29.1-27.8-36.6 0 0-22.9-15.7 1.6-15.4 0 0 24.9 2 38.6 25.8 21.9 38.6 58.6 27.5 72.9 20.9 2.3-16 8.8-27.1 16-33.7-55.9-6.2-112.3-14.3-112.3-110.5 0-27.5 7.6-41.3 23.6-58.9-2.6-6.5-11.1-33.3 2.6-67.9 20.9-6.5 69 27 69 27 20-5.6 41.5-8.5 62.8-8.5s42.8 2.9 62.8 8.5c0 0 48.1-33.6 69-27 13.7 34.7 5.2 61.4 2.6 67.9 16 17.7 25.8 31.5 25.8 58.9 0 96.5-58.9 104.2-114.8 110.5 9.2 7.9 17 22.9 17 46.4 0 33.7-.3 75.4-.3 83.6 0 6.5 4.6 14.4 17.3 12.1C428.2 457.8 496 362.9 496 252 496 113.3 383.5 8 244.8 8zM97.2 352.9c-1.3 1-1 3.3.7 5.2 1.6 1.6 3.9 2.3 5.2 1 1.3-1 1-3.3-.7-5.2-1.6-1.6-3.9-2.3-5.2-1zm-10.8-8.1c-.7 1.3.3 2.9 2.3 3.9 1.6 1 3.6.7 4.3-.7.7-1.3-.3-2.9-2.3-3.9-2-.6-3.6-.3-4.3.7zm32.4 35.6c-1.6 1.3-1 4.3 1.3 6.2 2.3 2.3 5.2 2.6 6.5 1 1.3-1.3.7-4.3-1.3-6.2-2.2-2.3-5.2-2.6-6.5-1zm-11.4-14.7c-1.6 1-1.6 3.6 0 5.9 1.6 2.3 4.3 3.3 5.6 2.3 1.6-1.3 1.6-3.9 0-6.2-1.4-2.3-4-3.3-5.6-2z"/></svg> @LizHareDogs](https://github.com/LizHareDogs)<br>
[<svg aria-label="Envelope" role="img" viewBox="0 0 512 512" style="height:1em;width:1em;vertical-align:-0.125em;margin-left:auto;margin-right:auto;font-size:inherit;fill:currentColor;overflow:visible;position:relative;"><title>Envelope</title><path d="M502.3 190.8c3.9-3.1 9.7-.2 9.7 4.7V400c0 26.5-21.5 48-48 48H48c-26.5 0-48-21.5-48-48V195.6c0-5 5.7-7.8 9.7-4.7 22.4 17.4 52.1 39.5 154.1 113.6 21.1 15.4 56.7 47.8 92.2 47.6 35.7.3 72-32.8 92.3-47.6 102-74.1 131.6-96.3 154-113.7zM256 320c23.2.4 56.6-29.2 73.4-41.4 132.7-96.3 142.8-104.7 173.4-128.7 5.8-4.5 9.2-11.5 9.2-18.9v-19c0-26.5-21.5-48-48-48H48C21.5 64 0 85.5 0 112v19c0 7.4 3.4 14.3 9.2 18.9 30.6 23.9 40.7 32.4 173.4 128.7 16.8 12.2 50.2 41.8 73.4 41.4z"/></svg> [email protected]](mailto:[email protected])
]<!--end of pull left-->
.pull-right[
## Collaborators
.large[Person 1]
Person 1 affiliations
.large[Person 2]
Person 2 affiliations
.large[Person 3]
Person 3 affiliations
] <!--end of pull right-->
---
background-image: url(img/avahi-cleesei.jpg)
background-position: 150%, 50%
background-size: contain
.pull-left[
# The Avahi cleesei lemur
> A species of woolly lemur native to western Madagascar, [with] brown skin with white regions on the rear and inside of the thighs and has a short damp nose, large plate eyes, and ears which hardly stand out from the skin.
.footnote[
- Original source: [Bemahara woolly lemur | Wikipedia](https://en.wikipedia.org/wiki/Bemaraha_woolly_lemur)
- Illustration by [Rachel Hudson](https://lemur.duke.edu/100-lemurs/)
] <!--end of footnote-->
] <!--end of pull left -->
???
This slide uses:
- a background image
- the `.pull-left[]` class
- a horizontal bar
- the `.footnote[]` class
- bullet list with `*`
- quotes with `>`
---
.left-column[
# Making lists
] <!--end of left column -->
.right-column[
Some facts about **lemurs**
1. Lemurs are considered _living fossils_ because they provide key clues about primate evolution
1. Lemurs are endemic to only Madagascar
1. 95% of lemur species are at risk of extinction
.footnote[
----
Original source: [Duke Lemur Center](https://lemur.duke.edu/protect/overview-madagascar-conservation-programs/)
] <!--end of footnote-->
] <!--end of right column -->
???
This slide uses:
- numbered list with `1.`
- a horizontal bar
- the `.footnote[]` class
This slide also uses the .left-column[] and .right-column[] classes. The left column occupies the left 20% of the slide and the right column the right 75% of the slide. Because the left column is so narrow, it looks best when only a couple of words occupy that space
---
# Inserting images
.pull-left[
### Lemurs are endemic to only Madagascar
.footnote[
Image from [Odyssey Travels](https://www.odyssey-travels.com/site/assets/maps/positive/madagascar.png)
] <!--end of footnote -->
] <!--end of pull left-->
.pull-right[
<!-- the image below is inserted using simple Markdown but I don't recommend inserting this way because you don't have control over the size of the image. In this case it fits the width of the "pull right" container just fine but the bottom runs off of the bottom edge of the slide. Using knitr::include_graphics() gives us much more control -->
] <!--end of pull right -->
???
This slide uses:
- two different heading sizes: `#` and `##`
- an image and accompanying alternative text inserted with `![]()`
- `.pull-left[]` and `.pull-right[]` classes
- the `.footnote[]` class
This slide also uses the .pull-left[] and .pull-right[] classes. Each column occupies half of the slide space.
---
# Tables
The `lemur_data` dataset contains life histories for a variety of lemurs housed at the [Duke Lemur Center](https://lemur.duke.edu/about/history-mission/) in North Carolina, USA.
<!-- this slide includes an HTML table with knitr::kable() and it takes up the entire width of the text area of the slide and ends right above the footnote -->
<table>
<thead>
<tr>
<th style="text-align:left;"> common_name </th>
<th style="text-align:left;"> name </th>
<th style="text-align:left;"> current_resident </th>
<th style="text-align:left;"> dob </th>
<th style="text-align:left;"> birth_type </th>
<th style="text-align:left;"> dod </th>
<th style="text-align:right;"> age </th>
<th style="text-align:right;"> weight </th>
</tr>
</thead>
<tbody>
<tr>
<td style="text-align:left;"> Aye-Aye </td>
<td style="text-align:left;"> Agatha </td>
<td style="text-align:left;"> Y </td>
<td style="text-align:left;"> 2017-06-07 </td>
<td style="text-align:left;"> captive </td>
<td style="text-align:left;"> NA </td>
<td style="text-align:right;"> 1.67 </td>
<td style="text-align:right;"> 2006 </td>
</tr>
<tr>
<td style="text-align:left;"> Aye-Aye </td>
<td style="text-align:left;"> Angelique </td>
<td style="text-align:left;"> N </td>
<td style="text-align:left;"> 2005-09-05 </td>
<td style="text-align:left;"> captive </td>
<td style="text-align:left;"> 2016-10-26 </td>
<td style="text-align:right;"> 11.15 </td>
<td style="text-align:right;"> 2820 </td>
</tr>
<tr>
<td style="text-align:left;"> Aye-Aye </td>
<td style="text-align:left;"> Annabel Lee </td>
<td style="text-align:left;"> N </td>
<td style="text-align:left;"> 1988-05-24 </td>
<td style="text-align:left;"> captive </td>
<td style="text-align:left;"> 1989-12-09 </td>
<td style="text-align:right;"> 1.55 </td>
<td style="text-align:right;"> 1689 </td>
</tr>
</tbody>
</table>
.footnote[
Data source: [Duke Lemur Center Data | Kaggle](https://www.kaggle.com/jessemostipak/duke-lemur-center-data)
] <!--end of footnote-->
???
This slide uses:
- an R code chunk to produce the HTML table
- the `.footnote[]` class
---
# Highlighting code
`> Inline code is differentiated primarily by a monospace font face`
You can highlight lines of code within code chunks using `#<<`. This adds a light gold background to the highlighted line of code, like to the `geom_histogram()` line in the example code chunk below:
```r
lemurs %>% filter(birth_type != "unknown") %>%
ggplot(aes(x = dob, fill = birth_type)) +
* geom_histogram() +
theme_minimal()
```
???
This slide uses:
- inline code highlighting with backticks ` `` `
- a code chunk to produce a ggplot
---
<!-- this slide creates a plot with a code chunk and that takes up the entire slide area -->
<img src="index_files/figure-html/unnamed-chunk-2-1.png" title="Histogram of unique lemur births between 1975 and 2019 showing more births took place in captivity than in the wild, with most births concentrated between 1975 and 2000. Births in the wild peaked near 1985 at almost 300 births and again near 2012 at about 100 births. Births in captivity had a plateau between 1980 and 1985 at about 25 births" alt="Histogram of unique lemur births between 1975 and 2019 showing more births took place in captivity than in the wild, with most births concentrated between 1975 and 2000. Births in the wild peaked near 1985 at almost 300 births and again near 2012 at about 100 births. Births in captivity had a plateau between 1980 and 1985 at about 25 births" width="4200" style="display: block; margin: auto;" />
???
This slide uses:
- a code chunk to produce a ggplot
- code chunk option `fig.height = 8` and `fig.width = 14` to control the figure height and width
---
class: middle, inverse
.pull-left[
# Thank you!
] <!--end of pull left -->
.pull-right[
.right[
<!--HTML code inserting a circular avatar of a square photo-->
<img
src="img/Profile_LH.JPG"
width="200px"
alt="Profile of Liz Hare"
style="border-radius: 50%;"/>
## Liz Hare, PhD
<!--Inserting social media links-->
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???
Thank you for joining me!
You can find my contact information linked on this slide if you want to get in touch, and I'm happy to take any questions.
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