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networkx takes forever to generate network stats in server.py #89

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lisabang opened this issue Jun 21, 2019 · 2 comments
Open

networkx takes forever to generate network stats in server.py #89

lisabang opened this issue Jun 21, 2019 · 2 comments

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@lisabang
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We initally had trouble getting the server to load the json output from term_stats because of the Apache timeout issue; our code takes more than 60 seconds to generate output. we can either precalculate network stats for given term subnetworks and serve it when the button is clicked, or come up with another way to make getting network stats faster.
@lisabang lisabang changed the title networkx takes forever to generate network stats in setup.py networkx takes forever to generate network stats in server.py Jun 22, 2019
@lisabang
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The df.to_json() memory leakage issue may have something to do with this: pandas-dev/pandas#24889

@schae234
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schae234 commented Jul 9, 2019

Interesting ... that would be a nice fix if it were something wrong with the df.to_json() method. Will definitely start here on our next sprint.

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@schae234 @lisabang