From 8a38c09a01d411bc8759f99e6f3a12da1099fdc8 Mon Sep 17 00:00:00 2001 From: lcolladotor Date: Fri, 26 Jul 2024 18:36:52 -0400 Subject: [PATCH] Add Zenodo badge --- README.Rmd | 1 + README.md | 3 ++- 2 files changed, 3 insertions(+), 1 deletion(-) diff --git a/README.Rmd b/README.Rmd index 57fab9b..dc2a732 100644 --- a/README.Rmd +++ b/README.Rmd @@ -16,6 +16,7 @@ knitr::opts_chunk$set( # visiumStitched +[![DOI](https://zenodo.org/badge/709323164.svg)](https://zenodo.org/doi/10.5281/zenodo.13012339) [![GitHub issues](https://img.shields.io/github/issues/LieberInstitute/visiumStitched)](https://github.com/LieberInstitute/visiumStitched/issues) [![GitHub pulls](https://img.shields.io/github/issues-pr/LieberInstitute/visiumStitched)](https://github.com/LieberInstitute/visiumStitched/pulls) [![Lifecycle: stable](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://lifecycle.r-lib.org/articles/stages.html#stable) diff --git a/README.md b/README.md index 82cd008..3009256 100644 --- a/README.md +++ b/README.md @@ -5,6 +5,7 @@ +[![DOI](https://zenodo.org/badge/709323164.svg)](https://zenodo.org/doi/10.5281/zenodo.13012339) [![GitHub issues](https://img.shields.io/github/issues/LieberInstitute/visiumStitched)](https://github.com/LieberInstitute/visiumStitched/issues) [![GitHub @@ -64,7 +65,7 @@ stopifnot(packageVersion("spatialLIBD") >= "1.17.8") ## Download the spot-level data, which is a SpatialExperiment object spe <- spatialLIBD::fetch_data(type = "visiumStitched_brain_spe") -#> 2024-07-26 17:05:30.544877 loading file /Users/leocollado/Library/Caches/org.R-project.R/R/BiocFileCache/154352e7328f0_visiumStitched_brain_spe.rds%3Frlkey%3Dnq6a82u23xuu9hohr86oodwdi%26dl%3D1 +#> 2024-07-26 18:36:29.721855 loading file /Users/leocollado/Library/Caches/org.R-project.R/R/BiocFileCache/154352e7328f0_visiumStitched_brain_spe.rds%3Frlkey%3Dnq6a82u23xuu9hohr86oodwdi%26dl%3D1 ## Explore the stitched data spe