diff --git a/README.Rmd b/README.Rmd
index a716f93..57fab9b 100644
--- a/README.Rmd
+++ b/README.Rmd
@@ -13,7 +13,7 @@ knitr::opts_chunk$set(
)
```
-# visiumStitched
+# visiumStitched
[![GitHub issues](https://img.shields.io/github/issues/LieberInstitute/visiumStitched)](https://github.com/LieberInstitute/visiumStitched/issues)
diff --git a/README.md b/README.md
index d6e95d1..681da73 100644
--- a/README.md
+++ b/README.md
@@ -1,7 +1,7 @@
-# visiumStitched
+# visiumStitched
@@ -64,7 +64,7 @@ stopifnot(packageVersion("spatialLIBD") >= "1.17.8")
## Download the spot-level data, which is a SpatialExperiment object
spe <- spatialLIBD::fetch_data(type = "visiumStitched_brain_spe")
-#> 2024-07-24 14:40:50.071424 loading file /Users/leocollado/Library/Caches/org.R-project.R/R/BiocFileCache/154352e7328f0_visiumStitched_brain_spe.rds%3Frlkey%3Dnq6a82u23xuu9hohr86oodwdi%26dl%3D1
+#> 2024-07-26 14:06:21.739878 loading file /Users/leocollado/Library/Caches/org.R-project.R/R/BiocFileCache/154352e7328f0_visiumStitched_brain_spe.rds%3Frlkey%3Dnq6a82u23xuu9hohr86oodwdi%26dl%3D1
## Explore the stitched data
spe
diff --git a/dev/.gitignore b/dev/.gitignore
new file mode 100644
index 0000000..5fa9740
--- /dev/null
+++ b/dev/.gitignore
@@ -0,0 +1 @@
+logo.pdf
diff --git a/dev/05_make_logo.R b/dev/05_make_logo.R
new file mode 100644
index 0000000..1521740
--- /dev/null
+++ b/dev/05_make_logo.R
@@ -0,0 +1,20 @@
+library("spatialLIBD")
+
+## Grab SpatialExperiment with normalized counts
+spe_norm <- fetch_data(type = "visiumStitched_brain_spe")
+
+## PRECAST k = 2 clusters
+spe_norm$precast_k2 <- factor(spe_norm$precast_k2)
+pdf(here::here("dev", "logo.pdf"), height = 7)
+vis_clus(
+ spe_norm,
+ clustervar = "precast_k2",
+ is_stitched = TRUE,
+ colors = c(
+ "2" = "darkblue",
+ "1" = "gold",
+ "NA" = "red"
+ ),
+ spatial = FALSE
+)
+dev.off()
diff --git a/man/figures/logo.png b/man/figures/logo.png
new file mode 100644
index 0000000..16101fe
Binary files /dev/null and b/man/figures/logo.png differ