From 4c550389de1df833cf6f1195b61935d209277393 Mon Sep 17 00:00:00 2001 From: Nick-Eagles Date: Mon, 16 Oct 2023 13:54:43 -0400 Subject: [PATCH] Fix installation instructions (not a Biioconductor package) --- README.Rmd | 16 +++------------- README.md | 13 +------------ 2 files changed, 4 insertions(+), 25 deletions(-) diff --git a/README.Rmd b/README.Rmd index 00b9c8f..ca685c9 100644 --- a/README.Rmd +++ b/README.Rmd @@ -29,20 +29,10 @@ It was developed at [JHPCE](https://jhpce.jhu.edu/) with SLURM 22.05.9 in mind, ## Installation instructions -Get the latest stable `R` release from [CRAN](http://cran.r-project.org/). Then install `slurmjobs` from [Bioconductor](http://bioconductor.org/) using the following code: +Get the latest stable `R` release from [CRAN](http://cran.r-project.org/). Then install `slurmjobs` from [GitHub](https://github.com/LieberInstitute/slurmjobs) with: -```{r 'install', eval = FALSE} -if (!requireNamespace("BiocManager", quietly = TRUE)) { - install.packages("BiocManager") -} - -BiocManager::install("slurmjobs") -``` - -And the development version from [GitHub](https://github.com/LieberInstitute/slurmjobs) with: - -```{r 'install_dev', eval = FALSE} -BiocManager::install("LieberInstitute/slurmjobs") +```{r 'install_gh', eval = FALSE} +remotes::install_github("LieberInstitute/slurmjobs") ``` ## Citation diff --git a/README.md b/README.md index 516da55..5e8f835 100644 --- a/README.md +++ b/README.md @@ -31,21 +31,10 @@ versions. Get the latest stable `R` release from [CRAN](http://cran.r-project.org/). Then install `slurmjobs` from -[Bioconductor](http://bioconductor.org/) using the following code: - -``` r -if (!requireNamespace("BiocManager", quietly = TRUE)) { - install.packages("BiocManager") -} - -BiocManager::install("slurmjobs") -``` - -And the development version from [GitHub](https://github.com/LieberInstitute/slurmjobs) with: ``` r -BiocManager::install("LieberInstitute/slurmjobs") +remotes::install_github("LieberInstitute/slurmjobs") ``` ## Citation