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local-ci.yml
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name: GraphScope CI on Local
on:
# Trigger the workflow on push or pull request,
# but only for the main branch
workflow_dispatch:
push:
branches:
- main
paths-ignore:
- 'CONTRIBUTORS'
- 'LICENSE'
- 'NOTICE.txt'
- '**.md'
- '**.rst'
- 'docs/**'
- 'demo/**'
- 'scripts/**'
- 'tutorials/**'
pull_request:
branches:
- main
paths:
- '.github/workflows/local-ci.yml'
- 'Makefile'
- 'analytical_engine/**'
- 'charts/**'
- 'coordinator/**'
- 'interactive_engine/**'
- 'k8s/**'
- 'learning_engine/**'
- 'proto/**'
- 'python/**'
- '!**.md'
- '!**.rst'
concurrency:
group: ${{ github.repository }}-${{ github.event.number || github.head_ref || github.sha }}-${{ github.workflow }}
cancel-in-progress: true
env:
GS_IMAGE: registry.cn-hongkong.aliyuncs.com/graphscope/graphscope
jobs:
# JOB to run change detection
changes:
runs-on: ubuntu-20.04
# Set job outputs to values from filter step
outputs:
gae-python: ${{ steps.filter.outputs.gae-python }}
networkx: ${{ steps.filter.outputs.networkx }}
gie-function-test: ${{ steps.filter.outputs.gie-function-test }}
steps:
# For push it's necessary to checkout the code
- uses: actions/checkout@v3
- name: Detect the tmate session
run: |
# hack here: get all field of build-wheels which run on self-hosted machine
if sed -n '/self-hosted/,/mini-test/ p' .github/workflows/local-ci.yml | \
grep -v "grep" - | grep "action-tmate"; then
echo 'WARNING!!!the self-hosted machine cannot run tmate session, please debug it manually'
exit 1
fi
# For pull requests it's not necessary to checkout the code
- uses: dorny/paths-filter@v2
id: filter
with:
base: main # Change detection against merge-base with main before push
filters: |
gae-python:
- 'proto/**'
- 'analytical_engine/**'
- 'python/graphscope/analytical/**'
- 'python/graphscope/client/**'
- 'python/graphscope/dataset/**'
- 'python/graphscope/deploy/**'
- 'python/graphscope/framework/**'
- 'python/graphscope/tests/unittest/**'
- 'coordinator/gscoordinator/**'
- '.github/workflows/ci.yml'
networkx:
- 'analytical_engine/apps/**'
- 'analytical_engine/frame/**'
- 'analytical_engine/core/**'
- 'python/graphscope/nx/**'
- 'python/requirements.txt'
gie-function-test:
- 'interactive_engine/**'
- 'python/graphscope/interactive/**'
- '.github/workflows/ci.yml'
gie-k8s-failover-test:
- 'interactive_engine/**'
- 'charts/ir-standalone/**'
- name: Cpp Format and Lint Check
run: |
# install clang-format
sudo curl -L https://github.com/muttleyxd/clang-tools-static-binaries/releases/download/master-22538c65/clang-format-8_linux-amd64 --output /usr/bin/clang-format
sudo chmod +x /usr/bin/clang-format
# collect the source files
cd analytical_engine/
files=$(find ./apps ./benchmarks ./core ./frame ./misc ./test \( -name "*.h" -o -name "*.cc" \))
# run format
clang-format -i --style=file $(echo $files)
# validate format
function prepend() { while read line; do echo "${1}${line}"; done; }
GIT_DIFF=$(git diff --ignore-submodules)
if [[ -n $GIT_DIFF ]]; then
echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"
echo "| clang-format failures found!"
echo "|"
echo "$GIT_DIFF" | prepend "| "
echo "|"
echo "| Run: "
echo "|"
echo "| make gsa_clformat"
echo "|"
echo "| to fix this error."
echo "|"
echo "| Ensure you are working with clang-format-8, which can be obtained from"
echo "|"
echo "| https://github.com/muttleyxd/clang-tools-static-binaries/releases"
echo "|"
echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"
exit -1
fi
# validate cpplint
function ec() { [[ "$1" == "-h" ]] && { shift && eval $* > /dev/null 2>&1; ec=$?; echo $ec; } || eval $*; ec=$?; }
# run cpplint
ec ./misc/cpplint.py $(echo $files)
if [[ "$ec" != "0" ]]; then
echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"
echo "| cpplint failures found! Run: "
echo "|"
echo "| make gsa_cpplint"
echo "|"
echo "| to fix this error."
echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"
exit -1
fi
- name: Python Format and Lint Check
run: |
echo "Checking formatting for $GITHUB_REPOSITORY"
pip3 install -r coordinator/requirements-dev.txt
pushd python
python3 -m isort --check --diff .
python3 -m black --check --diff .
python3 -m flake8 .
popd
pushd coordinator
python3 -m isort --check --diff .
python3 -m black --check --diff .
python3 -m flake8 .
- name: Setup Java11
uses: actions/setup-java@v3
with:
distribution: 'zulu'
java-version: '11'
- name: Java Format and Lint Check
run: |
wget https://github.com/google/google-java-format/releases/download/v1.13.0/google-java-format-1.13.0-all-deps.jar
files_to_format=$(git ls-files *.java)
# run formatter in-place
java -jar ${GITHUB_WORKSPACE}/google-java-format-1.13.0-all-deps.jar --aosp --skip-javadoc-formatting -i $files_to_format
# validate format
function prepend() { while read line; do echo "${1}${line}"; done; }
GIT_DIFF=$(git diff --ignore-submodules)
if [[ -n $GIT_DIFF ]]; then
echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"
echo "| google-java-format failures found!"
echo "|"
echo "$GIT_DIFF" | prepend "| "
echo "|"
echo "| Run: "
echo "|"
echo '| java -jar google-java-format-1.13.0-all-deps.jar --aosp --skip-javadoc-formatting -i $(git ls-files **/*.java)'
echo "|"
echo "| to fix this error."
echo "|"
echo "| Ensure you are working with google-java-format-1.13.0, which can be obtained from"
echo "|"
echo "| https://github.com/google/google-java-format/releases/download/v1.13.0/google-java-format-1.13.0-all-deps.jar"
echo "|"
echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"
exit -1
fi
build-wheels:
# Require the user id of the self-hosted is 1001, which may need to be
# configured manually when a new self-hosted runner is added.
runs-on: [self-hosted, ubuntu2004]
needs: [changes]
if: ${{ github.repository == 'alibaba/GraphScope' }}
steps:
- uses: actions/checkout@v3
with:
submodules: true
- uses: actions/cache@v3
with:
path: ~/.m2/repository
key: ${{ runner.os }}-maven-${{ hashFiles('**/pom.xml') }}
restore-keys: |
${{ runner.os }}-maven-
- uses: actions/cache@v3
with:
path: |
~/.cargo/bin/
~/.cargo/registry/index/
~/.cargo/registry/cache/
~/.cargo/git/db/
~/.cache/sccache
key: ${{ runner.os }}-cargo-${{ hashFiles('**/Cargo.lock') }}
- uses: actions/cache@v3
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-pip-
- name: Build Wheels
run: |
#sleep infinity
git submodule update --init
cd ${GITHUB_WORKSPACE}/learning_engine/graph-learn && git submodule update --init third_party/pybind11
# build graphscope wheels
cd ${GITHUB_WORKSPACE}/k8s/internal
# sudo -E -u runner make graphscope-py3-package GRAPHSCOPE_HOME=/opt/graphscope
make graphscope-py3-package GRAPHSCOPE_HOME=/opt/graphscope INSTALL_PREFIX=/home/graphscope/graphscope-install REGISTRY=registry-vpc.cn-hongkong.aliyuncs.com
# build client wheels
# sudo -E -u runner make graphscope-client-py3-package GRAPHSCOPE_HOME=/opt/graphscope
make graphscope-client-py3-package GRAPHSCOPE_HOME=/opt/graphscope INSTALL_PREFIX=/home/graphscope/graphscope-install REGISTRY=registry-vpc.cn-hongkong.aliyuncs.com
# package
cd ${GITHUB_WORKSPACE}
sudo chown $(id -u) -R .
tar -zcf client.tar.gz python/dist/wheelhouse/*.whl
tar -zcf graphscope.tar.gz coordinator/dist/
- name: Upload Artifact
uses: actions/upload-artifact@v3
with:
name: wheel-${{ github.sha }}
path: |
client.tar.gz
graphscope.tar.gz
retention-days: 5
mini-test:
runs-on: ubuntu-20.04
if: ${{ github.repository == 'alibaba/GraphScope' }}
needs: [build-wheels]
steps:
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
path: artifacts
- name: Prepare Environment
env:
GS_TEST_DIR: ${{ github.workspace }}/gstest
run: |
# install graphscope-client
cd artifacts
tar -zxf ./wheel-${{ github.sha }}/client.tar.gz
pushd python/dist/wheelhouse
for f in * ; do python3 -m pip install --no-cache-dir $f || true; done
popd
# install graphscope
tar -zxf ./wheel-${{ github.sha }}/graphscope.tar.gz
pushd coordinator/dist
python3 -m pip install --no-cache-dir ./*.whl
popd
pushd coordinator/dist/wheelhouse
python3 -m pip install --no-cache-dir ./*.whl
popd
# install tensorflow
python3 -m pip install --no-cache-dir pytest pytest-xdist "tensorflow" "pandas" --user
# install pytorch
python3 -m pip install --no-cache-dir "torch<=2.2.1" "networkx<=3.0" --index-url https://download.pytorch.org/whl/cpu
# install java
sudo apt update -y && sudo apt install openjdk-11-jdk -y
# download dataset
git clone -b master --single-branch --depth=1 https://github.com/7br/gstest.git ${GS_TEST_DIR}
- name: Setup tmate session
uses: mxschmitt/action-tmate@v3
if: false
- name: Run Minimum Test
env:
GS_TEST_DIR: ${{ github.workspace }}/gstest
run: |
python3 -m pytest -d --tx popen//python=python3 \
-s -v \
$(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/tests/minitest
- name: Upload GIE log
if: failure()
uses: actions/upload-artifact@v3
continue-on-error: true
with:
name: gie-log
path: ~/.local/log/graphscope
python-unittest:
runs-on: ubuntu-20.04
needs: [build-wheels, changes]
if: ${{ github.repository == 'alibaba/GraphScope' }}
defaults:
run:
shell: bash --noprofile --norc -eo pipefail {0}
strategy:
matrix:
deployment: ["standalone", "distributed"]
steps:
- uses: actions/checkout@v3
if: ${{ needs.changes.outputs.gae-python == 'true' }}
- uses: actions/download-artifact@v3
if: ${{ needs.changes.outputs.gae-python == 'true' }}
with:
path: artifacts
- name: Prepare Environment
if: ${{ needs.changes.outputs.gae-python == 'true' }}
run: |
# install graphscope-client
cd artifacts
tar -zxf ./wheel-${{ github.sha }}/client.tar.gz
pushd python/dist/wheelhouse
for f in * ; do python3 -m pip install --no-cache-dir $f || true; done
popd
# install graphscope
tar -zxf ./wheel-${{ github.sha }}/graphscope.tar.gz
pushd coordinator/dist
python3 -m pip install --no-cache-dir ./*.whl
popd
pushd coordinator/dist/wheelhouse
python3 -m pip install --no-cache-dir ./*.whl
popd
# install pytest
python3 -m pip install --no-cache-dir pytest pytest-cov pytest-timeout pytest-xdist
- name: Setup tmate session
uses: mxschmitt/action-tmate@v3
if: false
- name: Run Python Test
if: ${{ needs.changes.outputs.gae-python == 'true' }}
env:
GS_TEST_DIR: ${{ github.workspace }}/gstest
DEPLOYMENT: ${{ matrix.deployment }}
run: |
# download dataset
git clone -b master --single-branch --depth=1 https://github.com/7br/gstest.git ${GS_TEST_DIR}
export TMPDIR="${TMPDIR:-$(dirname $(mktemp))}"
python3 -m pytest -d --tx popen//python=python3 \
-s -v \
--cov=graphscope --cov-config=python/.coveragerc --cov-report=xml --cov-report=term \
--exitfirst \
$(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/tests/unittest
- name: Upload Coverage
if: ${{ needs.changes.outputs.gae-python == 'true' || github.ref == 'refs/heads/main' }}
uses: codecov/codecov-action@v3
continue-on-error: true
with:
file: ./coverage.xml
fail_ci_if_error: false
networkx-basic-test:
runs-on: ubuntu-20.04
needs: [build-wheels, changes]
if: ${{ github.repository == 'alibaba/GraphScope' }}
defaults:
run:
shell: bash
strategy:
matrix:
deployment: ["standalone", "distributed"]
steps:
- uses: actions/checkout@v3
if: ${{ needs.changes.outputs.networkx == 'true' }}
- uses: dorny/paths-filter@v2
if: ${{ needs.changes.outputs.networkx == 'true' }}
id: nx-filter
with:
filters: |
basic:
- 'analytical_engine/apps/**'
- 'analytical_engine/frame/**'
- 'analytical_engine/core/**'
- 'python/graphscope/nx/__init__.py'
- 'python/graphscope/nx/classes/**'
- 'python/graphscope/nx/!(tests)'
- 'python/graphscope/nx/tests/!(convert)'
- 'python/requirements.txt'
convert:
- 'python/graphscope/nx/convert.py'
- 'python/graphscope/nx/convert_matrix.py'
- 'python/graphscope/nx/tests/convert/**'
- uses: actions/download-artifact@v3
if: ${{ needs.changes.outputs.networkx == 'true' }}
with:
path: artifacts
- name: Prepare Environment
if: ${{ needs.changes.outputs.networkx == 'true' }}
env:
GS_TEST_DIR: ${{ github.workspace }}/gstest
run: |
# install graphscope-client
cd artifacts
tar -zxf ./wheel-${{ github.sha }}/client.tar.gz
pushd python/dist/wheelhouse
for f in * ; do python3 -m pip install --no-cache-dir $f || true; done
popd
# install graphscope
tar -zxf ./wheel-${{ github.sha }}/graphscope.tar.gz
pushd coordinator/dist
python3 -m pip install --no-cache-dir ./*.whl
popd
pushd coordinator/dist/wheelhouse
python3 -m pip install --no-cache-dir ./*.whl
popd
# install pytest
python3 -m pip install --no-cache-dir pytest pytest-xdist
# download dataset
git clone -b master --single-branch --depth=1 https://github.com/7br/gstest.git ${GS_TEST_DIR}
- name: Setup tmate session
uses: mxschmitt/action-tmate@v3
if: false
- name: Basic Test
if: ${{ needs.changes.outputs.networkx == 'true' && steps.nx-filter.outputs.basic == 'true' }}
env:
DEPLOYMENT: ${{ matrix.deployment }}
GS_TEST_DIR: ${{ github.workspace }}/gstest
run: |
pip3 show networkx
python3 -m pytest -d --tx popen//python=python3 \
--exitfirst -s -vvv \
$(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/nx/tests \
--ignore=$(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/nx/tests/convert
- name: Convert Test
if: ${{ needs.changes.outputs.networkx == 'true' && steps.nx-filter.outputs.convert == 'true' }}
env:
DEPLOYMENT: ${{ matrix.deployment }}
GS_TEST_DIR: ${{ github.workspace }}/gstest
run: |
pip3 show networkx
python3 -m pytest -d --tx popen//python=python3 \
--exitfirst -s -vvv \
$(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/nx/tests/convert
networkx-algo-and-generator-test:
runs-on: ubuntu-20.04
needs: [build-wheels, changes]
if: ${{ github.repository == 'alibaba/GraphScope' }}
strategy:
matrix:
deployment: ["standalone", "distributed"]
steps:
- uses: actions/checkout@v3
if: ${{ needs.changes.outputs.networkx == 'true' }}
- uses: dorny/paths-filter@v2
if: ${{ needs.changes.outputs.networkx == 'true' }}
id: nx-filter
with:
filters: |
algorithm:
- 'analytical_engine/apps/**'
- 'analytical_engine/frame/**'
- 'python/graphscope/nx/algorithms/builtin.py'
- 'python/graphscope/nx/algorithms/tests/builtin/**'
generator:
- 'python/graphscope/nx/classes/**'
- 'python/graphscope/nx/utils/**'
- 'python/graphscope/nx/generators/**'
io:
- 'python/graphscope/nx/readwrite/**'
- uses: actions/download-artifact@v3
if: ${{ needs.changes.outputs.networkx == 'true' }}
with:
path: artifacts
- name: Prepare Environment
if: ${{ needs.changes.outputs.networkx == 'true' }}
env:
GS_TEST_DIR: ${{ github.workspace }}/gstest
run: |
# install graphscope-client
cd artifacts
tar -zxf ./wheel-${{ github.sha }}/client.tar.gz
pushd python/dist/wheelhouse
for f in * ; do python3 -m pip install --no-cache-dir $f || true; done
popd
# install graphscope
tar -zxf ./wheel-${{ github.sha }}/graphscope.tar.gz
pushd coordinator/dist
python3 -m pip install --no-cache-dir ./*.whl
popd
pushd coordinator/dist/wheelhouse
python3 -m pip install --no-cache-dir ./*.whl
popd
# install pytest
python3 -m pip install --no-cache-dir pytest pytest-xdist
# download dataset
git clone -b master --single-branch --depth=1 https://github.com/7br/gstest.git ${GS_TEST_DIR}
- name: Algorithm test
if: ${{ needs.changes.outputs.networkx == 'true' && steps.nx-filter.outputs.algorithm == 'true' }}
env:
DEPLOYMENT: ${{ matrix.deployment }}
GS_TEST_DIR: ${{ github.workspace }}/gstest
run: |
pip3 show networkx
python3 -m pytest -d --tx popen//python=python3 \
--exitfirst -s -v \
$(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/nx/algorithms/tests/builtin
- name: Generator test
if: ${{ needs.changes.outputs.networkx == 'true' && steps.nx-filter.outputs.generator == 'true' }}
env:
DEPLOYMENT: ${{ matrix.deployment }}
GS_TEST_DIR: ${{ github.workspace }}/gstest
run: |
pip3 show networkx
python3 -m pytest -d --tx popen//python=python3 \
--exitfirst -s -v \
$(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/nx/generators/tests
- name: Readwrite test
if: ${{ needs.changes.outputs.networkx == 'true' && steps.nx-filter.outputs.io == 'true' }}
env:
DEPLOYMENT: ${{ matrix.deployment }}
run: |
python3 -m pytest -d --tx popen//python=python3 \
--exitfirst -s -v -m "not slow" \
$(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/nx/readwrite/tests