.gitlab-ci.yml

stages:
  - build_docker
  - test_docker
  - update_github
  - release-ts


variables:
  TS_PFEM_TARGET: "http://147.99.129.179:9009/toolshed"
  TS_PUBLIC_TARGET: "https://toolshed.g2.bx.psu.edu/"
  PROJECT_NAME: history_metadata_extractor
  DOCKER_IMAGE_NAME: history_metadata_extractor


Build docker image:
  stage: build_docker
  tags:
    - bash
  script:
    - echo "==================================";
    - echo "[info] Building Docker image for $DOCKER_IMAGE_NAME ";
    - docker build -t $DOCKER_IMAGE_NAME .


Planemo Lint Task:
  stage: test_docker
  image: $DOCKER_IMAGE_NAME
  before_script:
  script:
    - echo "==================================";
    - echo "[info] Linting $CI_PROJECT_NAME/*.xml ";
    - . "$PLANEMO_VENV_LOCATION"/bin/activate ;
    - planemo lint --fail_level error ./*.xml
  tags:
      - docker


Planemo Tool Testing:
  stage: test_docker
  image: $DOCKER_IMAGE_NAME
  script:
    - echo "==================================";
    - echo "[info] Testing ${TOOL_LOCATION} with planemo ";
    - . "$PLANEMO_VENV_LOCATION"/bin/activate ;
    - planemo test
      --conda_dependency_resolution
      --test_data=./test-data
      ./history_metadata_extractor.xml
  tags:
      - docker
  only:
    refs:
      - dev


release-ts:
  image: $DOCKER_IMAGE_NAME
  stage: release-ts
  tags:
    - docker
  script:
    - echo "planemo shed_update
      --shed_key=\$TOOLSHED_API_KEY
      --check_diff
      --shed_target \"${TS_PUBLIC_TARGET}\"
      "
    - . "$PLANEMO_VENV_LOCATION"/bin/activate
    - planemo shed_update
      --shed_key=$TOOLSHED_API_KEY
      --check_diff
      --shed_target "${TS_PUBLIC_TARGET}"
      --message=" master branch Updating"
  only:
    refs:
      - master