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11 Open 114 Closed
11 Open 114 Closed
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Issues list

Conda environment reproducibility
#329 opened Sep 11, 2024 by lkhilton
2
Documenting what each tool accomplishes
#216 opened Feb 23, 2022 by rdmorin
@Kdreval
generate_sets enhancement New feature or request priority.high
#174 opened Mar 11, 2021 by rdmorin
1
Rules should not explicitly refer to scripts as inputs
#166 opened Jan 18, 2021 by rdmorin
Specifying a Snakemake scheduler
#161 opened Jan 16, 2021 by lkhilton
4
add disk_mb resource to config for tools that consume a large amount of scratch space at runtime
#149 opened Dec 9, 2020 by rdmorin
8
Globally prepend module's "src" directory in modules to simplify use of bundled scripts
#146 opened Dec 7, 2020 by rdmorin
use _parent to name scratch subdirectories to match output directory base name
#107 opened Sep 13, 2020 by rdmorin
Consolidate bwa and .fai indexes in reference workflow enhancement New feature or request
#102 opened Sep 10, 2020 by lkhilton
1
Cellranger module new-module New module
#89 opened Aug 31, 2020 by rdmorin
1
U1 spliceosomal RNA variant calling new-module New module
#19 opened Apr 7, 2020 by rdmorin
ProTip! Updated in the last three days: updated:>2024-11-27.