.gitignore

# Ignore Data
**/**data**/**
# !data/natalia_eb_rna_smoothed.npz
# !data/wormTrNet2.npz
# !data/cell_info.csv
# !data/dyngen_expression_bif.csv

/assets/
/imgs/
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]

# DotEnv configuration
.env

# VS Code
.vscode/

# Jupyter NB Checkpoints
.ipynb_checkpoints/

# Mac OS-specific storage files
.DS_Store

results/**
.last_checked
*.sw?

_docs/
_proc/

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
pip-wheel-metadata/
share/python-wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST

old/
old2/
*.old
cflows/
cflows_
cflows_larger_data
cflows_larger_data_inverse_reverse
cflows_larger_data_no_subsample
cflows_larger_data_inverse
cflows copy Sep 16 9:08