diff --git a/man/gap_as_state.Rd b/man/gap_as_state.Rd index b2347a88..0cb61e83 100644 --- a/man/gap_as_state.Rd +++ b/man/gap_as_state.Rd @@ -36,7 +36,7 @@ rownames(contr) <- attr(tmp, "allLevels") contr } \seealso{ -\code{\link{phyDat}}, \code{\link{lt2amb}}, \code{\link{latag2n}}, +\code{\link{phyDat}}, \code{\link{ltg2amb}}, \code{\link{latag2n}}, \code{\link{ancestral.pml}}, \code{\link{gap_as_state}} } \author{ diff --git a/man/ltg2amb.Rd b/man/ltg2amb.Rd index f6e68f24..4e7b9655 100644 --- a/man/ltg2amb.Rd +++ b/man/ltg2amb.Rd @@ -1,5 +1,5 @@ % Generated by roxygen2: do not edit by hand -% Please edit documentation in R/lt2amb.R +% Please edit documentation in R/ltg2amb.R \name{ltg2amb} \alias{ltg2amb} \title{Replace leading and trailing alignment gaps with an ambiguous state}