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pathwaygene.txt
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pathwaygene.txt
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chr start end name pathway
chr1 120454175 120612317 NOTCH2 Notch
chr1 11166587 11322608 MTOR PI3K
chr1 16174358 16266950 SPEN Notch
chr1 46505811 46596345 PIK3R3 PI3K
chr1 197170591 197447585 CRB1 Hippo
chr1 214522038 214725024 PTPN14 Hippo
chr1 243651534 244006584 AKT3 PI3K
chr1 8071778 8086393 ERRFI1 RTK/RAS
chr1 40361095 40367687 MYCL MYC
chr1 51434366 51440306 CDKN2C cellcycle
chr1 115247084 115259515 NRAS RTK/RAS
chr1 155867598 155880706 RIT1 RTK/RAS
chr1 156785541 156851642 NTRK1 RTK/RAS
chr1 204485506 204527248 MDM4 p53
chr1 227058272 227083804 PSEN2 Notch
chr2 212240441 213403352 ERBB4 RTK/RAS
chr2 225334866 225450114 CUL3 Nrf2
chr2 29415639 30144477 ALK RTK/RAS
chr2 39208689 39347604 SOS1 RTK/RAS
chr2 85360582 85537511 TCF7L1 Wnt
chr2 148602085 148688396 ACVR2A TGFB
chr2 178095030 178128859 NFE2L2 Nrf2
chr2 202899309 202903160 FZD7 Wnt
chr2 230222344 230579286 DNER Notch
chr2 16080559 16087129 MYCN MYC
chr2 70142172 70170077 MXD1 MYC
chr2 74379724 74405441 MOB1A Hippo
chr2 208627309 208634143 FZD5 Wnt
chr3 138371539 138426463 PIK3CB PI3K
chr3 1134341 1445294 CNTN6 Notch
chr3 20081523 20195896 KAT2B Notch
chr3 30647993 30735634 TGFBR2 TGFB
chr3 119540799 119813264 GSK3B Wnt
chr3 178866310 178957881 PIK3CA PI3K
chr3 12625099 12705700 RAF1 RTK/RAS
chr3 41240914 41281944 CTNNB1 Wnt
chr4 55524094 55606881 KIT RTK/RAS
chr4 142944312 143767688 INPP4B PI3K
chr4 155155526 155312449 DCHS2 Hippo
chr4 71768056 71842460 MOB1B Hippo
chr4 126237566 126414087 FAT4 Hippo
chr4 140637544 141075233 MAML3 Notch
chr4 153242409 153456185 FBXW7 Notch
chr4 187508936 187644987 FAT1 Hippo
chr4 1795038 1810599 FGFR3 RTK/RAS
chr4 2249159 2263739 MXD4 MYC
chr4 55095255 55148145 PDGFRA RTK/RAS
chr4 154701741 154710228 SFRP2 Wnt
chr5 167719064 167899308 WWC1 Hippo
chr5 38938021 39074510 RICTOR PI3K
chr5 86564069 86687743 RASA1 RTK/RAS
chr5 112043201 112181936 APC Wnt
chr5 67511583 67597649 PIK3R1 PI3K
chr5 133450388 133483920 TCF7 Wnt
chr5 150883652 150948505 FAT2 Hippo
chr5 176513872 176525143 FGFR4 RTK/RAS
chr5 176732500 176739292 MXD3 MYC
chr6 41902670 42016632 CCND3 cellcycle
chr6 20402136 20493945 E2F3 cellcycle
chr6 117609529 117747018 ROS1 RTK/RAS
chr6 32162619 32191844 NOTCH4 Notch
chr6 36644236 36655116 CDKN1A cellcycle
chr6 149979288 150037561 LATS1 Hippo
chr7 92234234 92463231 CDK6 cellcycle
chr7 116312412 116438440 MET RTK/RAS
chr7 140433811 140624564 BRAF RTK/RAS
chr7 6414125 6443598 RAC1 RTK/RAS
chr7 55086713 55270769 EGFR RTK/RAS
chr7 37945533 37956525 SFRP4 Wnt
chr7 72848108 72850450 FZD9 Wnt
chr7 73007523 73038870 MLXIPL MYC
chr7 90893782 90898132 FZD1 Wnt
chr7 148395932 148498202 CUL1 Notch
chr7 151163097 151217010 RHEB PI3K
chr8 99466858 99837899 STK3 Hippo
chr8 38268655 38325363 FGFR1 RTK/RAS
chr8 41119475 41166990 SFRP1 Wnt
chr8 104310660 104345094 FZD6 Wnt
chr8 28351721 28431785 FZD3 Wnt
chr8 120428551 120436678 NOV Notch
chr8 128748314 128753680 MYC MYC
chr9 140500091 140509812 ARRDC1 Notch
chr9 4985085 5128183 JAK2 RTK/RAS
chr9 82186687 82341797 TLE4 Wnt
chr9 84198597 84304450 TLE1 Wnt
chr9 87283372 87430623 NTRK2 RTK/RAS
chr9 133589267 133763062 ABL1 RTK/RAS
chr9 135766734 135820020 TSC1 PI3K
chr9 21967750 21974826 CDKN2A cellcycle
chr9 22002901 22009312 CDKN2B cellcycle
chr9 101867370 101916474 TGFBR1 TGFB
chr9 126118445 126141034 CRB2 Hippo
chr9 139388884 139440238 NOTCH1 Notch
chrX 20168028 20284750 RPS6KA3 p53
chrX 47420498 47425374 ARAF RTK/RAS
chrX 63404996 63425624 AMER1 Wnt
chrX 153639853 153650065 TAZ Hippo
chr10 89623194 89731687 PTEN PI3K
chr10 114710008 114927437 TCF7L2 Wnt
chr10 123237843 123353481 FGFR2 RTK/RAS
chr10 35927176 35930362 FZD8 Wnt
chr10 43572516 43622952 RET RTK/RAS
chr10 99526507 99531756 SFRP5 Wnt
chr10 111967362 112047123 MXI1 MYC
chr11 92085261 92629636 FAT3 Hippo
chr11 68080076 68216743 LRP5 Wnt
chr11 69455872 69469242 CCND1 cellcycle
chr11 108093558 108239826 ATM p53
chr11 119076985 119178859 CBL RTK/RAS
chr11 532241 535567 HRAS RTK/RAS
chr11 6642554 6677080 DCHS1 Hippo
chr11 86656716 86666440 FZD4 Wnt
chr11 101981191 102104154 YAP1 Hippo
chr12 69201951 69239324 MDM2 p53
chr12 389222 498621 KDM5A Notch
chr12 12268958 12419811 LRP6 Wnt
chr12 56360552 56366573 CDK2 cellcycle
chr12 56473808 56497291 ERBB3 RTK/RAS
chr12 118587605 118628367 TAOK3 Hippo
chr12 122516633 122631894 MLXIP MYC
chr12 124808956 125052010 NCOR2 Notch
chr12 4382901 4414522 CCND2 cellcycle
chr12 12870203 12875317 CDKN1B cellcycle
chr12 25357722 25403865 KRAS RTK/RAS
chr12 52345450 52390863 ACVR1B TGFB
chr12 58141509 58146230 CDK4 cellcycle
chr12 65444403 65515346 WIF1 Wnt
chr12 112856701 112924727 PTPN11 RTK/RAS
chr12 130647003 130650285 FZD10 Wnt
chr13 21547174 21635722 LATS2 Hippo
chr13 48877882 49056026 RB1 cellcycle
chr13 28577410 28674729 FLT3 RTK/RAS
chr14 51100297 51135071 SAV1 Hippo
chr14 65472818 65569262 MAX MYC
chr14 105235685 105259938 AKT1 PI3K
chr14 105607317 105635161 JAG2 Notch
chr15 66679210 66783882 MAP2K1 RTK/RAS
chr15 67358194 67487533 SMAD3 TGFB
chr15 70340128 70387124 TLE3 Wnt
chr15 88419987 88799962 NTRK3 RTK/RAS
chr15 99191767 99507759 IGF1R RTK/RAS
chr15 41952609 42062141 MGA MYC
chr16 337439 402676 AXIN1 Wnt
chr16 3775054 3930121 CREBBP Notch
chr16 2097895 2138721 TSC2 PI3K
chr16 29985187 29999726 TAOK2 Hippo
chr17 78518624 78940173 RPTOR PI3K
chr17 15933407 16097953 NCOR1 Notch
chr17 27717942 27878921 TAOK1 Hippo
chr17 29421944 29549782 NF1 RTK/RAS
chr17 37844336 37884915 ERBB2 RTK/RAS
chr17 56429860 56494943 RNF43 Wnt
chr17 80200536 80231594 CSNK1D Hippo
chr17 2287353 2304258 MNT MYC
chr17 7571719 7578811 TP53 p53
chr17 40719077 40725221 MLX MYC
chr17 42634811 42638630 FZD2 Wnt
chr17 63524680 63557740 AXIN2 Wnt
chr18 45359465 45456970 SMAD2 TGFB
chr18 48556582 48611412 SMAD4 TGFB
chr19 2997635 3029165 TLE2 Wnt
chr19 40736223 40771258 AKT2 PI3K
chr19 1205797 1228434 STK11 PI3K
chr19 4090318 4124126 MAP2K2 RTK/RAS
chr19 10596795 10613481 KEAP1 Nrf2
chr19 15270443 15311792 NOTCH3 Notch
chr19 18263987 18281343 PIK3R2 PI3K
chr19 30302900 30315224 CCNE1 cellcycle
chr19 49843851 49864752 TEAD2 Hippo
chr19 52693054 52729678 PPP2R1A PI3K
chr20 43595114 43708618 STK4 Hippo
chr20 32263291 32274210 E2F1 cellcycle
chr22 29279754 29453476 ZNRF3 Wnt
chr22 22113945 22221970 MAPK1 RTK/RAS
chr22 29083730 29137822 CHEK2 p53
chr22 29999544 30079904 NF2 Hippo
chr22 41488613 41576081 EP300 Notch
chr22 38686696 38713413 CSNK1E Hippo
chr1 62901974 62917475 USP1 DDR
chr1 91726322 91870426 HFM1 DDR
chr1 2115898 2126214 FAAP20 DDR
chr1 11734536 11741271 MAD2L2 DDR
chr1 28218034 28241308 RPA2 DDR
chr1 40974390 40981722 EXO5 DDR
chr1 45265896 45271667 PLK3 DDR
chr1 45794913 45805629 MUTYH DDR
chr1 46713366 46744145 RAD54L DDR
chr1 68150859 68154021 GADD45A DDR
chr1 114447240 114456708 DCLRE1B DDR
chr1 115110177 115124265 BCAS2 DDR
chr1 155232658 155243320 CLK2 DDR
chr1 202300784 202311094 UBE2T DDR
chr1 226548391 226595801 PARP1 DDR
chr1 231473681 231490775 SPRTN DDR
chr1 242011492 242053241 EXO1 DDR
chr2 28111575 28561768 BRE DDR
chr2 216974019 217071016 XRCC5 DDR
chr2 225334866 225450114 CUL3 DDR
chr2 17935124 17967187 GEN1 DDR
chr2 47630205 47710367 MSH2 DDR
chr2 58386377 58468515 FANCL DDR
chr2 152266396 152333860 RIF1 DDR
chr2 190648810 190742355 PMS1 DDR
chr2 215590369 215674435 BARD1 DDR
chr2 10262694 10271546 RRM2 DDR
chr2 17845078 17935096 SMC6 DDR
chr2 48010220 48034092 MSH6 DDR
chr2 68694690 68807294 APLF DDR
chr2 75185774 75196859 POLE4 DDR
chr2 100016937 100106518 REV1 DDR
chr2 128014865 128051670 ERCC3 DDR
chr2 209100950 209119027 IDH1 DDR
chr2 219940045 220025587 NHEJ1 DDR
chr3 10068070 10141344 FANCD2 DDR
chr3 47627377 47823405 SMARCC1 DDR
chr3 48488113 48507054 ATRIP DDR
chr3 121150272 121264853 POLQ DDR
chr3 142168076 142297668 ATR DDR
chr3 148747850 148804341 HLTF DDR
chr3 186507680 186524290 RFC4 DDR
chr3 193853930 193856401 HES1 DDR
chr3 196195653 196230639 RNF168 DDR
chr3 4344987 4356086 SETMAR DDR
chr3 8918879 9005159 RAD18 DDR
chr3 9791627 9799091 OGG1 DDR
chr3 14186646 14220172 XPC DDR
chr3 37034840 37092337 MLH1 DDR
chr3 39093476 39138162 WDR48 DDR
chr3 48198667 48229801 CDC25A DDR
chr3 48506918 48509044 TREX1 DDR
chr3 51976320 51982883 PARP3 DDR
chr3 73045893 73118352 PPP4R2 DDR
chr3 129149786 129159022 MBD4 DDR
chr3 133319448 133380737 TOPBP1 DDR
chr4 2073684 2243891 POLN DDR
chr4 178230990 178284092 NEIL3 DDR
chr4 2470794 2517586 RNF4 DDR
chr4 39289068 39368001 RFC1 DDR
chr4 95128758 95212443 SMARCAD1 DDR
chr4 1341053 1381837 UVSSA DDR
chr4 84328495 84377036 HELQ DDR
chr4 84382091 84406290 FAM175A DDR
chr4 155456148 155471585 PLRG1 DDR
chr4 174252526 174254920 HMGB2 DDR
chr5 68530621 68573257 CDK7 DDR
chr5 68665123 68710628 RAD17 DDR
chr5 74807574 74901645 POLK DDR
chr5 79950466 80172634 MSH3 DDR
chr5 82373227 82606888 XRCC4 DDR
chr5 137620953 137667566 CDC25C DDR
chr5 176332005 176433443 UIMC1 DDR
chr5 34905364 34915731 RAD1 DDR
chr5 60169658 60240905 ERCC8 DDR
chr5 70330950 70363497 GTF2H2 DDR
chr5 86690078 86708721 CCNH DDR
chr5 131892615 131980313 RAD50 DDR
chr5 133706866 133727799 UBE2B DDR
chr6 80714321 80752244 TTK DDR
chr6 30667583 30685458 MDC1 DDR
chr6 37321747 37362514 RNF8 DDR
chr6 100956069 101329248 ASCC3 DDR
chr6 111620233 111804918 REV3L DDR
chr6 146205942 146285233 SHPRH DDR
chr6 158589378 158620376 GTF2H5 DDR
chr6 21593971 21598850 SOX4 DDR
chr6 24650204 24667115 TDP2 DDR
chr6 30875976 30881880 GTF2H4 DDR
chr6 35420137 35434881 FANCE DDR
chr6 43543877 43588260 POLH DDR
chr6 44355250 44418161 CDC5L DDR
chr7 6010555 6048659 PMS2 DDR
chr7 7676193 7758238 RPA3 DDR
chr7 73645831 73668788 RFC2 DDR
chr7 2281856 2290780 NUDT1 DDR
chr7 40172341 40174251 MPLKIP DDR
chr7 44111660 44122139 POLM DDR
chr7 44154278 44163107 POLD2 DDR
chr7 48002884 48019222 HUS1 DDR
chr7 75956107 75988342 YWHAG DDR
chr7 152343582 152373250 XRCC2 DDR
chr7 154735399 154794682 PAXIP1 DDR
chr8 95384187 95449180 RAD54B DDR
chr8 30890777 31031277 WRN DDR
chr8 42195972 42229331 POLB DDR
chr8 48685668 48872743 PRKDC DDR
chr8 54879113 54935016 TCEA1 DDR
chr8 90945563 90996899 NBN DDR
chr8 126104082 126379367 NSMCE2 DDR
chr8 11627171 11644854 NEIL2 DDR
chr8 21964382 21966932 NUDT18 DDR
chr8 48920994 48974454 UBE2V2 DDR
chr8 103216728 103251059 RRM2B DDR
chr8 145736666 145743210 RECQL4 DDR
chr9 72873877 72969789 SMC5 DDR
chr9 97861335 98079536 FANCC DDR
chr9 32972603 33001574 APTX DDR
chr9 35073834 35080013 FANCG DDR
chr9 86595636 86618989 RMI1 DDR
chr9 92219926 92221470 GADD45G DDR
chr9 100437190 100459691 XPA DDR
chr9 110045516 110094475 RAD23B DDR
chr9 116169514 116172955 POLE3 DDR
chr9 131037657 131051268 SWI5 DDR
chrX 24711949 25015103 POLA1 DDR
chrX 76760355 77041755 ATRX DDR
chrX 14861528 14891191 FANCB DDR
chrX 55026755 55034306 APEX2 DDR
chrX 96138906 96140466 RPA4 DDR
chrX 118708429 118718392 UBE2A DDR
chrX 151995870 151999301 CETN2 DDR
chrX 152710177 152711945 TREX2 DDR
chrX 154299694 154351349 BRCC3 DDR
chr10 123716602 123734743 NSMCE4A DDR
chr10 50662525 50747169 ERCC6 DDR
chr10 51026320 51371371 PARG DDR
chr10 89623194 89731687 PTEN DDR
chr10 99218080 99258366 MMS19 DDR
chr10 115594482 115613975 DCLRE1A DDR
chr10 131265447 131565884 MGMT DDR
chr10 14946609 14996431 DCLRE1C DDR
chr10 70173820 70231730 DNA2 DDR
chr10 98064084 98098321 DNTT DDR
chr10 103338638 103348027 POLL DDR
chr11 18343815 18388590 GTF2H1 DDR
chr11 43902356 43941825 ALKBH3 DDR
chr11 61066918 61100684 DDB1 DDR
chr11 74303574 74354105 POLD3 DDR
chr11 108093558 108239826 ATM DDR
chr11 4115914 4160155 RRM1 DDR
chr11 9595227 9611314 WEE1 DDR
chr11 22644078 22647387 FANCF DDR
chr11 47236492 47260769 DDB2 DDR
chr11 60658018 60674061 PRPF19 DDR
chr11 61560108 61564716 FEN1 DDR
chr11 65479472 65487077 KAT5 DDR
chr11 65627871 65633914 MUS81 DDR
chr11 67118235 67121067 POLD4 DDR
chr11 67159422 67165883 RAD9A DDR
chr11 74459912 74553458 RNF169 DDR
chr11 107879407 107978488 CUL5 DDR
chr11 118964583 118966177 H2AFX DDR
chr11 125495030 125527042 CHEK1 DDR
chr12 1020901 1058888 RAD52 DDR
chr12 56618124 56623638 NABP2 DDR
chr12 21621843 21654603 RECQL DDR
chr12 124118285 124147151 GTF2H3 DDR
chr12 54574141 54582778 SMUG1 DDR
chr12 93802087 93836026 UBE2N DDR
chr12 102513948 102542785 PARPBP DDR
chr12 104359592 104382656 TDG DDR
chr12 104697509 104698983 EID3 DDR
chr12 109525992 109531293 ALKBH2 DDR
chr12 109535398 109548798 UNG DDR
chr12 110940004 110969891 RAD9B DDR
chr12 118454465 118470044 RFC5 DDR
chr12 133200347 133264110 POLE DDR
chr13 24995068 25086948 PARP4 DDR
chr13 31032052 31191734 HMGB1 DDR
chr13 32889616 32973809 BRCA2 DDR
chr13 34392205 34540695 RFC3 DDR
chr13 113862506 113919392 CUL4A DDR
chr13 48611702 48615638 NUDT15 DDR
chr13 103498190 103528351 ERCC5 DDR
chr13 108859789 108867130 LIG4 DDR
chr14 75480466 75518235 MLH3 DDR
chr14 45605141 45636395 FANCM DDR
chr14 61201458 61435398 MNAT1 DDR
chr14 68286495 68938393 RAD51B DDR
chr14 90422245 90511108 TDP1 DDR
chr14 20811772 20826063 PARP2 DDR
chr14 20923289 20925931 APEX1 DDR
chr14 50110269 50155098 POLE2 DDR
chr14 78138748 78174356 ALKBH1 DDR
chr14 94640648 94694183 PPP4R4 DDR
chr14 104163953 104181823 XRCC3 DDR
chr15 28356182 28567298 HERC2 DDR
chr15 41271077 41408444 INO80 DDR
chr15 43699411 43785354 TP53BP1 DDR
chr15 48623291 48635566 DUT DDR
chr15 79165122 79190081 MORF4L1 DDR
chr15 91260557 91358692 BLM DDR
chr15 29560352 29562020 NSMCE3 DDR
chr15 31196054 31203991 FAN1 DDR
chr15 40987326 41024356 RAD51 DDR
chr15 75639330 75647592 NEIL1 DDR
chr15 89164526 89175512 AEN DDR
chr15 89787193 89860362 FANCI DDR
chr15 89859535 89878026 POLG DDR
chr16 2089815 2097870 NTHL1 DDR
chr16 27236314 27280113 NSMCE1 DDR
chr16 127017 135850 MPG DDR
chr16 14014013 14046205 ERCC4 DDR
chr16 28962317 28977786 NFATC2IP DDR
chr16 1543351 1560460 TELO2 DDR
chr16 1823228 1826239 EME2 DDR
chr16 3631181 3661607 SLX4 DDR
chr16 11439294 11445620 RMI2 DDR
chr16 23614482 23652678 PALB2 DDR
chr16 29465821 29469545 SLX1B DDR
chr16 30087296 30096698 PPP4C DDR
chr16 30205163 30208887 SLX1A DDR
chr16 89803958 89883065 FANCA DDR
chr17 59756546 59940920 BRIP1 DDR
chr17 73622924 73663269 RECQL5 DDR
chr17 1247833 1303556 YWHAE DDR
chr17 1733272 1802848 RPA1 DDR
chr17 7571719 7578811 TP53 DDR
chr17 8043787 8055753 PER1 DDR
chr17 15879873 15903006 ZSWIM7 DDR
chr17 18174741 18218406 TOP3A DDR
chr17 33307516 33330191 LIG3 DDR
chr17 33426810 33446888 RAD51D DDR
chr17 34245083 34257303 RDM1 DDR
chr17 41196311 41276132 BRCA1 DDR
chr17 48450580 48458820 EME1 DDR
chr17 56769933 56772741 RAD51C DDR
chr17 78388966 78404171 ENDOV DDR
chr17 79506910 79519429 FAAP100 DDR
chr18 9546788 9614605 PPP4R1 DDR
chr18 13726658 13764555 RNMT DDR
chr18 20513294 20606449 RBBP8 DDR
chr18 657603 673499 TYMS DDR
chr18 51795848 51824604 POLI DDR
chr19 11071597 11172958 SMARCA4 DDR
chr19 48618701 48673860 LIG1 DDR
chr19 4402659 4443394 CHAF1A DDR
chr19 7684410 7694439 XAB2 DDR
chr19 11485382 11487627 SWSAP1 DDR
chr19 13056627 13064457 RAD23A DDR
chr19 17378184 17390162 BABAM1 DDR
chr19 33463122 33468401 FAAP24 DDR
chr19 44047463 44079730 XRCC1 DDR
chr19 45854648 45873845 ERCC2 DDR
chr19 45910590 45927177 ERCC1 DDR
chr19 50364459 50370822 PNKP DDR
chr19 50887579 50921275 POLD1 DDR
chr20 43514239 43537173 YWHAB DDR
chr20 3767418 3786768 CDC25B DDR
chr20 5095598 5100647 PCNA DDR
chr20 55904830 55919049 SPO11 DDR
chr20 62289162 62327606 RTEL1 DDR
chr22 29083730 29137822 CHEK2 DDR
chr22 38914953 38964414 DMC1 DDR
chr22 19419424 19423601 MRPL40 DDR
chr22 22311396 22337240 TOP3B DDR
chr22 41347350 41369019 RBX1 DDR
chr22 42017166 42060052 XRCC6 DDR