DESCRIPTION

Package: GenotypePlot
Title: Visualises Genotypes Within a VCF File Located Somewhere on the System, or Loaded as a vcfR Object
Version: 0.2.1
Authors@R:
    person(given = "James",
           family = "Whiting",
           role = c("aut", "cre"),
           email = "jwhiting2315@gmail.com",
           comment = c(ORCID = "0000-0001-8936-4991"))
Description: GenotypePlot performs visualisation of biallelic SNP VCFs, as well as simple clustering for preliminary haplotype analyses.
    Other available filtering/plotting options include handling allele frequencies, polarisation, phased haplotypes, invariant filtering and missing data filtering.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Imports:
    data.table,
    ggdendro,
    ggplot2,
    glue,
    tidyr,
    vcfR,
    reshape2,
    pegas,
    adegenet,
    viridis,
    stats,
    bedr,
    cowplot,
    ade4
Suggests:
    testthat