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Visualisation

Toolbox for data visualisation and integration.

MultiPlot_UI

GUI to load and display and replay different raw and/or preprocessed signals for a given recording session. This includes:

  1. Modular and in-GUI toggable "plot areas" for:
    • Behavioural movies (with tracking overlay if available)
    • Calcium imaging movies (raw, with optional and adjustable filtering option, overlay of extracted ROIs)
    • Heatmaps (e.g. heart rate or neuronal activity mapped onto the paradigm, adjustable binning size and contrast)
    • Occupancy map or trajectory, location of events within the paradigm (e.g. optogenetics stimulations)
  2. Traces data:
    • Heart rate, speed, motion measure, etc
    • Behaviours and/or Keypoint Moseq sylables as rasters, subselection possible from a dropdown list
    • Calcium imaging traces (the ROIs on the movies possess callback that allow to select the neurons to display)

image