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Implement basic interproscan visualization component #39

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kemsguy7
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@kemsguy7 kemsguy7 commented Oct 21, 2024

  • implement basic interproscan visualization using nightingale library. install needed components, define types for custom elements. takes as inputs: a sequence and a list of tracks/rows, each with a label and list of fragments/locations with labels and types
  • generate some fake data for viz on testbed

@kemsguy7
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@vincerubinetti and @jananiravi , please kindly review

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@vincerubinetti
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@kemsguy7 I am in the process of reviewing this and developing it more. There will be a lot more work needed here to make it a fully-fledged component. Note that this is not a critique of your work; we didn't define what to do or how far to go. Feel free to consider this done from your end, and claim another outreachy issue if you want.

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@vincerubinetti thanks.
Would love to be involved in further development too. I'll continue working on other issues for the time being.

@vincerubinetti vincerubinetti changed the title [OUTREACHY] Kemsguy7-IPR-VIZ Implement basic interproscan visualization component Oct 23, 2024
@vincerubinetti vincerubinetti linked an issue Oct 23, 2024 that may be closed by this pull request
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IPR viz
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