From 9204a0453670f4d67cbfb6d6e6cf3ed233fe829c Mon Sep 17 00:00:00 2001 From: Sharu Paul Date: Wed, 26 Jun 2024 10:44:34 -0500 Subject: [PATCH 1/2] minor edits in vscode, authors --- .../04-devel-environment/01a-vscode-basics.md | 9 ++++++++- .../assets/images/VSC_remoteexplorer.png | Bin 0 -> 32626 bytes _data/authors.yml | 2 +- _pages/people.md | 2 +- 4 files changed, 10 insertions(+), 3 deletions(-) create mode 100644 _collection-base/04-devel-environment/assets/images/VSC_remoteexplorer.png diff --git a/_collection-base/04-devel-environment/01a-vscode-basics.md b/_collection-base/04-devel-environment/01a-vscode-basics.md index 5c3a884e..6adc5c80 100644 --- a/_collection-base/04-devel-environment/01a-vscode-basics.md +++ b/_collection-base/04-devel-environment/01a-vscode-basics.md @@ -97,7 +97,14 @@ VSCode has powerful tools to help you find and fix errors in your code. To start ## Version Control -If you are not familiar with Git, check out these tutorials about and . It is possible to work with Git repositories directly from the VSC editor. You can clone a repo, or initialize a repo for your project from the terminal. `Source Control` pane on the left is used to manage your Git repositories. You will need to log in to your GitHub account the first time you use Git. The common Git operations such as Pull, Push, Clone, Commit, and Create Branch can be performed from here. Check this page for a list of Git commands on VSCode. +If you are not familiar with Git, check out these tutorials about and . It is possible to work with Git repositories directly from the VSC editor. You will need to log in to your GitHub account the first time you use Git. To log in, select `Remote Explorer` icon from left-hand taskbar. + +![remoteexp]({{ images_path }}/VSC_remoteexplorer.png) + +Select `Sign in to GitHub` (you may need to let the page load a little before the sign in button appears). If your system asks *The extension `GitHub Codespaces` wants to sign in using GitHub.* then select allow. You will be directed to the GitHub login webpage. Select `Authorize Visual-Studio-Code` to connect your GitHub account to VSCode. + + +You can clone a repo, or initialize a repo for your project from the terminal. `Source Control` pane on the left is used to manage your Git repositories. You will need to log in to your GitHub account the first time you use Git. The common Git operations such as Pull, Push, Clone, Commit, and Create Branch can be performed from here. Check this page for a list of Git commands on VSCode. ![VC]({{ images_path }}/VSC_sourcecontrol.png) diff --git a/_collection-base/04-devel-environment/assets/images/VSC_remoteexplorer.png b/_collection-base/04-devel-environment/assets/images/VSC_remoteexplorer.png new file mode 100644 index 0000000000000000000000000000000000000000..4f1d8313974662aebcace3c85aa7d72bd8258a0a GIT binary patch literal 32626 zcmeFXWl&wswl0i21cEy(2oMPF?(XigaCdii4elCT6Wj?7!3hxD-QBq>dEc|o-gQrX zU+r7>{@YNiYR>K+qenku^ysI%XM}>BI5Gkr0vH$=vZREF5*QfxGw4?e2Lmc8lvTe3 zy#!ha3oA$p3zOJ8+L>Bdn}C5)O(Z8sQ;8@N4EPO%i$p4Z?$<@40gy{0ClnMjTJm6> zb{K_bc$u}j85@;ZCx;9USOJa3=Dw?a+)@16SPNjAzTtP9m9b1xF1b45-h1NO<3{Be zN=v~%1|J>guB!`ANlX7(o(n%M!A#ofGBYMC7c=mYo6ojP;Yc=hWYe#ZuVp_&As_x- zIwvK4I|)y1#>B@}G?a8{Po;a6=9vUUgf*HKs`IGL`U&u4T*u8i;6{9H3LUU8cei^kkiguugC;--eXTrU79=43ye4qFt zf$LXs78f~+I?q(hAvR=~|KvMM{Cqkmdvk;J`4FIRv+ZGbqR;`YpP6&#vG1WTuJ8bd z?K+jq>)+!x#U7>QPK-CVas0IucgemJoc0~(%9Kx;k|{}Y;5_<6F|K)Q=wgeI9sd)- 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zGEe!L$LlBqPs_n)IGFhO&sK23+louF%KK;O7I>=4Pl*bc69v5KPmSLH+X+!m6wrSg gDwQpc4S%GWdbaAM?&SuIPDS`2qaWfbr~0IiR#$p8QV literal 0 HcmV?d00001 diff --git a/_data/authors.yml b/_data/authors.yml index 88f581ec..c7caeb44 100644 --- a/_data/authors.yml +++ b/_data/authors.yml @@ -40,7 +40,7 @@ Viswa Satheesh: Sharu Paul: name : "Sharu Paul" - bio : "Sharu is a Research Scientist at the Genome Informatics Facility at Iowa State University. His background is in Biotechnology with a Ph.D. in Genetics and Genomics. His research is wide-ranging, covering topics from Single-Cell Analyses to the use of Deep Neural Networks. By employing an extensive range of bioinformatic analyses, he seeks to solve big data problems and contributes to developing workshops and tutorials for USDA scientists." + bio : "Sharu Paul is a Research Scientist at the Genome Informatics Facility at Iowa State University. His background is in Biotechnology with a Ph.D. in Genetics and Genomics. His research is wide-ranging, covering topics from Single-Cell Analyses to the building of Deep Neural Networks. By employing an extensive range of bioinformatic analyses, he seeks to solve big data problems and contributes to developing workshops and tutorials for USDA scientists." avatar : "/assets/images/people/Sharu.jpg" twitter : "PaulSharu" email : "mailto:sharu@iastate.edu" diff --git a/_pages/people.md b/_pages/people.md index 6e252bf0..df389078 100644 --- a/_pages/people.md +++ b/_pages/people.md @@ -39,7 +39,7 @@ Satheesh is a Research Scientist III at the Genome Informatics Facility at Iowa ### Sharu Paul ![Sharu](../assets/images/people/Sharu.jpg){: .align-left} -Sharu is a Research Scientist at the Genome Informatics Facility at Iowa State University. His background is in Biotechnology with a Ph.D. in Genetics and Genomics. His research is wide-ranging, covering topics from Single-Cell Analyses to the use of Deep Neural Networks. By employing an extensive range of bioinformatic analyses, he seeks to solve big data problems and contributes to developing workshops and tutorials for USDA scientists. +Sharu Paul is a Research Scientist at the Genome Informatics Facility at Iowa State University. His background is in Biotechnology with a Ph.D. in Genetics and Genomics. His research is wide-ranging, covering topics from Single-Cell Analyses to the building of Deep Neural Networks. By employing an extensive range of bioinformatic analyses, he seeks to solve big data problems and contributes to developing workshops and tutorials for USDA scientists. ### Arun S. Seetharam From 7b6c8fe2be8fd3b65dd587a797b78b69e6a0fb47 Mon Sep 17 00:00:00 2001 From: Sharu Paul Date: Thu, 27 Jun 2024 14:57:41 -0500 Subject: [PATCH 2/2] fix typo --- _collection-base/02-computing-machine/02-must-have-software.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/_collection-base/02-computing-machine/02-must-have-software.md b/_collection-base/02-computing-machine/02-must-have-software.md index f857d2f0..d6772bb1 100644 --- a/_collection-base/02-computing-machine/02-must-have-software.md +++ b/_collection-base/02-computing-machine/02-must-have-software.md @@ -1,5 +1,5 @@ --- -title: "Must-have softaware" +title: "Must-have software" layout: single author: Aleksandra Badaczewska author_profile: true