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Extract table metadata without Pandas support #5
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djcomlab
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Extracting table metadata without Pandas support
Extract table metadata without Pandas support
Apr 24, 2018
This is to enable extra metadata to be loaded from within the Galaxy ISA-Tab datatype, as the Galaxy devs don't want to add Pandas to the Galaxy core requirements. |
Data files and materials now available via 'Lazy' parsers in latest release. |
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Right now you can't extract table metadata without using Pandas. In order to at least get something out, we could implement a very lazy loader that only extracts data files lists and factor values to get some summary data from the tables without having to do a full load into memory of the experimental graphs.
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