Manuscript figures

[jhnnsnk]

• ??? graphical abstract
• reference vs. upscaled model: sketches and parameters
  • see arxiv Fig 1
  • A: replace sketches by simplified ones
  • B: decide for most striking parameters to show: neuron numbers, in-degrees, external in-degrees (further parameters could also be visualized in appendix)
• reference vs. upscaled model: raster plots
  • see arxiv Fig 2
  • do not show intermediate state
  • Manuscript figures comparing raster and statistics of reference and upscaled models #86
  • Extract data from 1mm2 center disc for analysis #91
  • decide for final state of upscaled model (maybe start with Hannah's MC and scale this one up?)
• reference vs. upscaled model: statistics
  • see arxiv Fig 3
  • decide for final state of upscaled model
• parameter spaces
  • see arxiv Fig 4
  • postponed (lots of work, not sure if worth it, no full circle with LFP results, could be reduced to just showing a few distinct states if at all)
• evoked activity
  • see arxiv Fig 5
  • show only one parameter combination
  • postponed to decide if parameter scan should be kept
• morphologies
  • see arxiv Fig 6
  • consider newer morphologies?
• illustration and traces for LFP
  • see arXiv Fig 7
  • 3D sketch with electrodes
  • show traces from 3 locations (color-coded), two neighbors and one far away
  • add PSDs from arxiv Fig 8 (maybe individual traces from chosen electrodes)
• distance-dependent correlations
  • see arxiv Fig 8
  • keep only lower row of arxiv Fig 8, make this only about the correlations
• distance-dependent coherences
  • see arxiv Fig 9
  • keep (hope to get the gamma band back with new parameters)
• ??? evoked LFP

[espenhgn]

Note on the LFP figure panels: The panels from preprint are reimplemented, only the figure layouts with panels in place is missing.