README.rst

pykCSD

NOTE: This module is currently not maintained. We recommend using

kCSD-python : https://github.com/Neuroinflab/kCSD-python

The relevant documentation with extensive tutorials is provided there. Daniel Wójcik

pykCSD

Kernel Current Source Density is a recently developed method for estimating the density of trans-membrane current sources, which can be used for a detailed study of neuronal synaptic dynamics.

It can estimate current source density from potentials measured with irregularly placed linear, planar and spatial electrodes.

• Free software: BSD license
• Documentation: http://pykCSD.rtfd.org.

Features

• Estimation of potentials and CSD in 1D, 2D, 3D case for both static and dynamic recordings
• Visualization of the estimated quantities

TODO

• tracking the units
• management of big datasets
• GUI