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Segmentation adapter doesn't work with multiple wavelengths #371

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frisograce opened this issue Jul 31, 2024 · 0 comments · Fixed by #372
Open

Segmentation adapter doesn't work with multiple wavelengths #371

frisograce opened this issue Jul 31, 2024 · 0 comments · Fixed by #372
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Describe the bug
Segmentation adapter doesn't work with multiple wavelengths

Specify a priority (low, medium, high)

To Reproduce
Steps to reproduce the behavior:

  1. Setup python 3.10
  2. Setup virtual environment
  3. Install SIMPA 'v0.9.1'
  4. Run SIMPA script segmentation_loader.py with wavelengths: [700, 800]
  5. See error KeyError: 'gamma'

Current Behavior
KeyError: 'gamma' occurs

Expected behavior
To be able to run both the wavelengths

Environment (please complete the following information):

  • OS: Ubuntu
  • SIMPA version [e.g. 0.9.1]
  • IDE PyCharm
@frisograce frisograce added the bug Something isn't working label Jul 31, 2024
@frisograce frisograce self-assigned this Jul 31, 2024
@frisograce frisograce mentioned this issue Jul 31, 2024
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T 371 segmentation loader with multiple wavelengths IMSY-DKFZ/simpa
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