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Update segmentation loader to have reasonable values #366

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merged 13 commits into from
Aug 13, 2024

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frisograce
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@frisograce frisograce commented Jul 29, 2024

Please check the following before creating the pull request (PR):

  • Did you run automatic tests?
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  • Is the code provided in the PR still backwards compatible to previous SIMPA versions?

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Hi, I think I have found the route of the problem where there some dodgy default values. I would expect that the problem will still occur for the default testing values of 0.3mm spacing as this will be too much for your GPU to handle. Perhaps we should also reduce the size of this volume or something so that it works with the benchmarking values?

Fixes #364

@frisograce frisograce requested review from kdreher and jgroehl July 29, 2024 14:23
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I've just changed the maths of how the example works so that it will be okay with any inputted spacing. I have also cropped the area of the segmentation mask so that we can use this for benchmarking.

@frisograce frisograce self-assigned this Jul 30, 2024
@frisograce frisograce added the bug Something isn't working label Jul 30, 2024
@frisograce frisograce linked an issue Jul 30, 2024 that may be closed by this pull request
@kdreher kdreher merged commit 3a224c3 into develop Aug 13, 2024
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Segmentation Loader does not work with Benchmarking Script
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