From c760d6a365943ecc2f44d43198643659da75fd45 Mon Sep 17 00:00:00 2001 From: Hamdiye Uzuner Date: Wed, 4 Sep 2024 13:19:46 +0200 Subject: [PATCH] fix: fix same in previous commit in read_clipping.smk --- workflow/rules/read_clipping.smk | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflow/rules/read_clipping.smk b/workflow/rules/read_clipping.smk index 8d93acc7..f1472469 100644 --- a/workflow/rules/read_clipping.smk +++ b/workflow/rules/read_clipping.smk @@ -22,7 +22,7 @@ rule samtools_sort: rule bed_to_bedpe: input: - check_bed_for_URL(config["preprocessing"]["amplicon-primers"]), + check_bed_for_URL(workflow.source_path("../resources/nCoV-2019.primer.bed")), output: "resources/primer.bedpe", log: