From b977c77eee7c2b4173a270450b19b6e4e8caf6ff Mon Sep 17 00:00:00 2001
From: vBassewitz <104062464+vBassewitz@users.noreply.github.com>
Date: Wed, 18 Dec 2024 12:59:01 +0100
Subject: [PATCH] Update ref.smk (just for testing purpose)

added a check for openssl version
---
 workflow/rules/ref.smk | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/workflow/rules/ref.smk b/workflow/rules/ref.smk
index 1458b6ec..9a444d47 100644
--- a/workflow/rules/ref.smk
+++ b/workflow/rules/ref.smk
@@ -34,7 +34,7 @@ rule get_genome:
         ncbi_api_requests=1,
     shell:
         "((esearch -db nucleotide -query '{params.accession}' | "
-        "efetch -format fasta > {output}) && [ -s {output} ]) 2> {log}"
+        "efetch -format fasta > {output}) && openssl version && [ -s {output} ]) 2> {log}"
 
 
 rule get_genome_annotation: