From 086dabe5fb710876a03933414969f66e7c6276e6 Mon Sep 17 00:00:00 2001
From: LIU Lei <33851080+Hydro3639@users.noreply.github.com>
Date: Sun, 25 Dec 2022 09:12:48 +0100
Subject: [PATCH] semibin: semi -> self

---
 bin/nanophase.meta | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/bin/nanophase.meta b/bin/nanophase.meta
index 278b787..1b89995 100644
--- a/bin/nanophase.meta
+++ b/bin/nanophase.meta
@@ -350,7 +350,7 @@ semibin_binning(){
 	samtools index -@ $N_threads $OutDIR/02-LongBins/INITIAL_BINNING/semibin/contig.mapped.sorted.bam >>$OutDIR/02-LongBins/INITIAL_BINNING/semibin/semibin.log 2>&1
 	
 	## binning ## should check tranining type
-	SemiBin single_easy_bin --environment $semibin_model -i $OutDIR/01-LongAssemblies/assembly.fasta -b $OutDIR/02-LongBins/INITIAL_BINNING/semibin/contig.mapped.sorted.bam -p $N_threads --semi-supervised --sequencing-type=long_read -o $OutDIR/02-LongBins/INITIAL_BINNING/semibin/semibin-output >>$OutDIR/02-LongBins/INITIAL_BINNING/semibin/semibin.log 2>&1
+	SemiBin single_easy_bin --environment $semibin_model -i $OutDIR/01-LongAssemblies/assembly.fasta -b $OutDIR/02-LongBins/INITIAL_BINNING/semibin/contig.mapped.sorted.bam -p $N_threads --self-supervised --sequencing-type=long_read -o $OutDIR/02-LongBins/INITIAL_BINNING/semibin/semibin-output >>$OutDIR/02-LongBins/INITIAL_BINNING/semibin/semibin.log 2>&1
 
 	## check if finished
 	str_semibin=`grep "Finished binning" $OutDIR/02-LongBins/INITIAL_BINNING/semibin/semibin.log 2>/dev/null | wc -l`