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Update ChEMBL target and ChEMBL compound ontology terms in the OLS #455

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CP-SB opened this issue Jun 6, 2024 · 2 comments
Open

Update ChEMBL target and ChEMBL compound ontology terms in the OLS #455

CP-SB opened this issue Jun 6, 2024 · 2 comments

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@CP-SB
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CP-SB commented Jun 6, 2024

Hi Luana,

Please can you update the search-url for ChEMBL Targets and ChEMBL compounds in the obo file.

chembl target search url: https://github.com/HUPO-PSI/psi-mi-CV/blob/master/psi-mi.obo#L11380
chembl compounds search url: https://github.com/HUPO-PSI/psi-mi-CV/blob/master/psi-mi.obo#L7583

The search-url is currently set as ‘http://www.ebi.ac.uk/chembldb/index.php/compound/inspect/$%7Bac%7D’, and needs to be updated to ‘https://www.ebi.ac.uk/chembl/target_report_card/$%7Bac%7D’ for both terms.

Thank you

@luanalicata
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Hi, I did it.
Could you please check if it is OK?
https://github.com/HUPO-PSI/psi-mi-CV/blob/master/psi-mi.obo
Than you

@CP-SB
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CP-SB commented Jun 18, 2024

Hi Luana,

Thank you for doing this. We will check and confirm when the next database release takes place.

Suchu

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