diff --git a/caiman/source_extraction/cnmf/params.py b/caiman/source_extraction/cnmf/params.py index a0cc9dd73..1afb9f0bd 100644 --- a/caiman/source_extraction/cnmf/params.py +++ b/caiman/source_extraction/cnmf/params.py @@ -575,7 +575,7 @@ def __init__(self, fnames=None, dims=None, dxy=(1, 1), 'decay_time': decay_time, 'dxy': dxy, 'var_name_hdf5': var_name_hdf5, - 'caiman_version': '1.6', + 'caiman_version': '1.6.1', 'last_commit': None, 'mmap_F': None, 'mmap_C': None diff --git a/caiman/tests/comparison_humans_online.py b/caiman/tests/comparison_humans_online.py index 7fad4a378..631308ca9 100644 --- a/caiman/tests/comparison_humans_online.py +++ b/caiman/tests/comparison_humans_online.py @@ -82,8 +82,8 @@ 'p': 1, # order of indicator dynamics 'gnb': 2, # number of background components 'epochs': 2, # number of passes over the data - 'rval_thr': 0.75, # spatial correlation threshold - 'max_thr': 0.15, # parameter for thresholding components when cleaning up shapes + 'rval_thr': 0.80, # spatial correlation threshold + 'max_thr': 0.25, # parameter for thresholding components when cleaning up shapes 'mot_corr': False, # flag for motion correction (set to False to compare directly on the same FOV) 'min_num_trial': 10, # maximum number of candidate components per frame 'use_peak_max': True, @@ -129,7 +129,7 @@ # % YST params_movie[3] = { 'folder_name': 'YST/', - 'epochs': 2, + 'epochs': 3, 'ds_factor': 1, 'fr': 10, 'decay_time': .75, @@ -140,7 +140,7 @@ # % neurofinder.04.00.test params_movie[4] = { 'folder_name': 'N.04.00.t/', - 'epochs': 2, + 'epochs': 3, 'ds_factor': 1, 'fr': 8, 'gSig': [7, 7], # expected half size of neurons