From 73072b550b0ad25db3e6e3c12a7d41833c2dc573 Mon Sep 17 00:00:00 2001
From: Phil Ewels <phil.ewels@scilifelab.se>
Date: Mon, 12 Jun 2017 11:16:00 +0200
Subject: [PATCH] Typo fixes

---
 conf/aws.config      | 2 +-
 docs/installation.md | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/conf/aws.config b/conf/aws.config
index 1c2950a..3e5fd86 100644
--- a/conf/aws.config
+++ b/conf/aws.config
@@ -67,7 +67,7 @@ process {
 
 params {
   saveReference = true
-  // illumina iGenomes reference file paths on UPPMAX
+  // illumina iGenomes reference file paths on AWS
   genomes {
     'GRCh37' {
       bismark = 's3://ngi-igenomes/igenomes/Homo_sapiens/Ensembl/GRCh37/Sequence/BismarkIndex'
diff --git a/docs/installation.md b/docs/installation.md
index d21ed56..c4a3803 100644
--- a/docs/installation.md
+++ b/docs/installation.md
@@ -94,7 +94,7 @@ A reference genome path can be specified on the command line each time you run w
 params {
   genomes {
     'YOUR-ID' {
-      bismar  = '<PATH TO BISMARK REF>/BismarkIndex'
+      bismark  = '<PATH TO BISMARK REF>/BismarkIndex'
       fasta  = '<PATH TO FASTA FILE>/genome.fa'
     }
     'OTHER-GENOME' {