From bfd3229c434b55c9de84263f64f28aee1bfa98a9 Mon Sep 17 00:00:00 2001 From: amal Date: Fri, 24 Nov 2023 07:53:53 +0530 Subject: [PATCH 1/2] Add unresolved dependancies --- CoreProcessingPipelineScripts/CNN/Mask_RCNN/environment.yml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/CoreProcessingPipelineScripts/CNN/Mask_RCNN/environment.yml b/CoreProcessingPipelineScripts/CNN/Mask_RCNN/environment.yml index 50c6aa4..b9fa391 100644 --- a/CoreProcessingPipelineScripts/CNN/Mask_RCNN/environment.yml +++ b/CoreProcessingPipelineScripts/CNN/Mask_RCNN/environment.yml @@ -130,5 +130,6 @@ dependencies: - yaml=0.1.7=had09818_2 - zlib=1.2.11=h7b6447c_3 - zstd=1.3.7=h0b5b093_0 + - lxml + - libiconv prefix: /users/miroslav.polacek/.conda/envs/TreeRingCNN - From 7ed45d1bc7a09a57dee49341302f2ddd086c551a Mon Sep 17 00:00:00 2001 From: amal Date: Fri, 24 Nov 2023 07:53:59 +0530 Subject: [PATCH 2/2] Update readme --- README.md | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index 2d1e9d7..b10d5b7 100644 --- a/README.md +++ b/README.md @@ -43,6 +43,11 @@ Input can be either path to an individual core image or a folder containing imag ``` Output_folder specifies the location where to save results. +``` +--weightRing +``` +Retrained weights in a form of .h5 file can be passed using this argument. + ### Optional ``` --cropUpandDown @@ -64,7 +69,3 @@ How many overlapping masks should be considered a good detection. Default is 3 --print_detections=yes ``` Saves images with detected masks and distances in “pngs” subfolder within output folder. Default is no. -``` ---weightRing -``` -Retrained weights in a form of .h5 file can be passed using this argument.